Id Trinity | FTRINITY_DN57036_c0_g1_i14 |
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Name Transcript | Ll_transcript_172986 |
Sequence | GTGAAGAAAGGGAATGCTTCTGGAAAGTCTAGTAAGACAGATTCAGCTGTAAGTTGTGAAAACTTGTATTGCTCTTTTTGTTGATCCCTTTGTGGTGTGT GTTTTAAATGCGGTTATTGTTACATTGTGTTTAATGCGTCTGTTGACAATTGTGAAAATATGGGGTTGATGTGGCCACAATTGTGGTTGCAAGCTATGTG GTTATTGAGACTGCCAAAATCGCAATATTGATGCTGCAATTGTGATAGACTGCAAATTAAAATCATGGTGACTAGTGGTATTCATAGTAATGAGTAATTT TGATCCCTGAATAACTAGTGTTATTCATAGAATTTTGGAATTGAAAGTAGCAGTTGTATCCAAGTGAAGTGTGGGGTAAATAGTTACTAGGTTTGCTCAT TAACCTTTCATATCATGTACCATATTTGCCTTTTTTGTACCGCATATCAGGTTCACTTGAAAGGTAGTATTGTAAAAATAATGTAATTGGGGGCAAACAA ATCATGTATCTATTGCCACTTGTGTTGCTTTCCTAGTAACTAGGCACCCATTTGTCTAGGCTTAAAAGTGATTTGATAAATGTAAGTTTGGCAAGTTCAG CTTTTGTTTTTGCAGCTTCTGTTTTTTTATTAAACCCAACCAAATAAGTGTACAAGTGTCAGCTATGATTTTTTAATCAAAATTTTCATTTCTTTTTCTA AATAAACAAATAAATGGCCCAAATTACATGACCTATACAGCTCAAGTTTGAGGTTTCTGTCTTATACTTTACTGTTTACCAAAATAATCTAGACTTTTGA GGTTGTTGGAATTTTGGTGTCTATGTTATCATCACTGTATTACACTTTGTAGAATCCCTTATAGGTCCTCAAGAGTCATAATTGTGTATTTATTTTATGG ATAGAATGGGGATGGTGACGATGGGAAATCAAAGAGAGCACAATATGAAGGTCCTGATCCTGACTTGGCTGAAATGCTTGAAAGAGATGTACTGGAAACC TCTCCCGGAGTCAGGTGGGATGATGTTGCCGGCCTCACTGAAGCCAAAAGGCTTCTAGAGGAAGCTGTTGTGCTTCCACTATGGATGCCTGAGTATTTCC AGGGAATTAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGTCCTCCGGGCACTGGGAAGACACTTCTTGCTAAAGCTGTTGCTACTGAATGTGGCACCAC TTTCTTCAATGTTTCTTCTGCTACTTTAGCTTCTAAGTGGCGTGGAGAGAGTGAGCGCATGGTACGGTGTCTATTCGATCTTGCAAGAGCATATGCACCA AGTACTATTTTCATTGATGAAATTGATTCTCTGTGCAATGCCAGGGGGGCTTCTGGGGAGCATGAATCATCCAGAAGGGTGAAATCTGAACTTCTAGTTC AGGTTGATGGTGTAAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_65262; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_172986
Blastp | Katanin p60 ATPase-containing subunit A1 from Arabidopsis with 95.27% of identity |
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Blastx | Katanin p60 ATPase-containing subunit A1 from Arabidopsis with 93.29% of identity |
Eggnog | katanin p60(ENOG410XPN7) |
Kegg | Link to kegg annotations (AT1G80350) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436390.1) |
Pfam | Holliday junction DNA helicase ruvB N-terminus (PF05496.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |