Ll_transcript_172835

• Id Trinity: FTRINITY_DN57038_c10_g1_i1
• Name Transcript: Ll_transcript_172835
• Sequence: GTTGCCGAATCATTCTGATTTTTCAATAAATGGAGCAAAAACCGACGACACCGGCGGAAGAAACGGTGGCGATTCCATCGTCCTCCGTGGTAGCCGACGA ATCAAAACCTTCTTCTCTTTTTCCTCTTTTCTCGATACCTAATTCCTCATCTCTTCAGACTACAAATTCGGTTCCTCAATGGCTTTGCAACTCCAGCTTC AACTCCGACGTTTCCCTCATAAACGACGCCGCCGCATCTCAACTCCACCACGAAACCGCCGAATATCCATCGCAAGACGACGACGGAGATAATGATGAGA AGCAACCGTTTCGTCCCTCGTACGAGATTTTGAAATCTTCGGAATCCGACGGAGAGAGAAGGGAGAGAGGGAAGAAGGATAAGAAGAGAAAGAAGAAGAA GCGGAAACATGAGAGAAGCGAACTTGATGGTTACGGTTCGAGAAAGTCTCGCGTTCGAGCTTGGGCTGATTCGGAGACTAACACTTCCAAAGATTATTAC ATTGATTCTCATGGCGATCCTGATAACCTCGCATTCGGAAGTATGTACAGAATGGATATTGCTCGGTACAAATCTTACAATCCTTCGAAACTATCTGGTC TACTACATGTTCGTGGTTTGTATTCGTGGAACCAGACTGGCTCACTCTGGGAAAGAGATGGCGATGTTGATTCATTGGACAGTAAAATGAAGTCTGGTGG TCGTTATTGGTCTGGGAAGTATATTGCTTTGGAACGACATAAGAGCTTTAAGCGTGTTCGTCTTGTTACGCCAAAAATGTCTGCTGCTAGTGCTACGACG CAAAATGACTTCATACCTTTATCAGAGGTTGGGACATCTCATGGAGCTGTGGACAGTGATCCTGTCTCTGAAACTTCTGCAGCACTTGAGGAATCTTGGG AAGATGAAATGTTGAACAAAACTCGGGAGTTCAACAAGCTGACAAGGGAGCACCCCCATGATGAAAAAGTTTGGTTAGATTTTGCAGAGTTCCAAGATAG GGTTTCAGGGATGCAACGACAGAAAGGTGCTCGCTTGCAAACGCTTGAAAAGAAGATTAGCATTCTGGAGAAGGCAGTTGAGCTTAACCCAGACAATGAA GAGCTGTTGCTTTGTCTTTTGAAATCTTATCAAAGGAGAGACAACTCAGATGTTTTAATTGGGAGATGGGAGACAATACTTTTGCGGCACTCTGGAAGTT ACAGATTATGGAGAGAATTCTTGCACGTCGTTCAGAGAAACTTCTCCAGATTTAAGGTTTCAGAGATTAGGAAGATGTACACACATGCAATTGAAGCTTT ATCTGCTTCATGCAGCAAGCACTCTAGGCAGGTTCACCATTTTTATGACCCTTCTTCATCGGATCCTGTCATTGTTCAGCTAGAACTTGGTCTTGTGGAT ATATTTGTCAGTCTCTGCAGATTTGAGTGGCAGGCTGGTTATAGGGAATTGGCTACTGCTTTGTTTCAGGCAGAAATTGAGTTTAGTTTGTTTTGCCCAC CTTTGCTCCTCACAGAACAGAGTAAGCAAAGACTGTTTGAGCATTTTTGGAATAGTGATGGTGCTAGAGTTGGAGAAGAAGGAGCTCTTGGTTGGTCCTC GTGGTTGGAGAAAGAGGAGGAAACTAGGCAGAGAATTATGAAGGAGGAGCTCTCACAAGAGAATGAAGCTGGTGGTTGGACTGGTTGGTCAGAACCATTT TCTAAAGATAAGGAGGGTATTATCGATGTTGAAAATGAAGCCAACAATGATTTGGTTCTGGAGGATATTCAAGATGAAGATGAACATAAAGATGTTGAGC CAGAAGTTGATACTGAAAGTTTGATGAAAATGCTAGGAATTGATGTCAATTCTGGGGATGGCAATGAAGTGAATGAAGTTTCAACCTGGATCAAATGGGC AGAGGAAGAGTCTTCTAGAGATTGTGATCAGTGGATGCCAATTCGTAGGAAATCAGGAACAACCTCTGCTAGTACTGGAGCTCATGAAACAGAAGAAGAT GAGCATCTCTTGAGAACCATATTGTATGAAGATGTGAATGAATACCTGTTTTCCTTGAGCACAGCAGAGGCTCGGCTATCTTTGGTGTCCCAATTCATTG ACTTCTATGGCGGGAAGATATCTCAATCGATTTGCTCAAACAGTTCGAGTTGGACAGAGAGTGTCCTTAGCTTGGAGGATCTGCCAGATTCCATGTTAGA GAAGTTGAAATGCATTCACGAAGTTTTAACACGAACACAAAGCAGTCCCATTGGTTTCAGTTTTGAATTCATATCAGGCAGTTTGTCTAAGAATGCTGGT ATGATGAATTTTCTAAGGAATGTTGTCCTGCTCTGTTTGTCTGTTTTTGCGCGTAATTACGTATTGGAAGAAGCTGTCCTTATTTCTGAAGAGCTTTATG TTACAAAAATGAGTCCTTCTAACTCGATGGTTACACCATGTCGAGCTTTGGCGAAGTCTCTATTAAAAAGTGATCGACAGGATGTATTGCTATGTGGTGT ATATGCAAGGAGAGAGGCTAATTATGGCAACATTGATCTTGCAAGAAAAGTTTTCGATATGGCTTTGTTATCTGTGGATGGGCTTCCTGCGGAGCTACAG TCCAATGCTCCTCTTTTATATTTCTGGTATGCTGAGATGGAGCTTGCGAATAACTCCTATGACATTCGTGAATCTTCACATCGTGCAATACATATATTAT CATGCTTAGGAAGTGGTACGAAATACAGCCCATTTAAAAGTCAGGCATCAAGTTTGCAACTGCTTAGAGCCCATCAAGGGTTTAAAGAAAAAATGAGAAC AGTACGATCATCATGGATTCGTGGTATAATAGATGACCAGTCTGTATCTCTAATATGTTCAGCTGCATTGTTTGAGGAGCTCACCACTGGATGGGATGCA GGTGTTGAAGTTTTAAATCAAGCTTTTGCAACTGTGCTTCCAGATAGGAGAAGCCATAGCTATCAACTCGAATTTTTGTTTAACTATTACATAAGGATGC TTCAGAAACATCAGAGACAATCAAGTCTGGTGAAAGTCTGGGAATCAATTTCTCAGGGCCTCCAGATATATCCCTTCAGTCCAGATCTTCTTAAAGGTGT AGTGGAGGTTGGCCATTTGCACACTACATCTAATAAATTGCGGTGGATGGTAGATGACCTTTGTTACAAGAAACCATCTGTCCTTCTCTGGCTTTTTGCA TTGTGCTATGAGATGTCTAGAGGTGGCACCCAACACAGAATCCGTGGGTTGTTTGAGAAGGCATTGAGTAACGATAGGCTTTGCAGCTCAGTTGTACTGT GGCGTTGCTACATTGCGTATGAATTGGACATTGCACATGATGCTTCTGCAGCTCGACGTATTTTCTTCCGAGCTATCCATTCTTGTCCCTGGTCAAAAAG GTTATGGTTAGATGGGTTTCTGAAACTGAACTCTGTCCTGAATGCAAAAGAGCTATCGGATCTCCATGAAGTTATGGTGGATAAGGAACTGAATCTGAGA ACTGATATTTATGAAATCCTTTTGCAAGAGTCATGATGACTTTTGCTCTCCCGTGCTGCCAGAATTTCGTTCCCGGGAGGGGGCAAGCATGGGTGCTGCC CCCTTACTATATCTTGTAAAATCCTGAGATAACTTTGATTTTATCCTTACATGACAAAGTTTTACATTGTCAATATGATATAATATTATGATTTTAATAT TTATTTTAATGAGGATGAATATGTTTGACTTTCAAAAATCCACACATGGAAGATTTTGGAGGGTTCGAGAAACCCTCCAAAACCTTCACATCTCCTTCAT CCAACTCCCAAACAAGGGGAAGGCTTTCCAAAGCCATCATTTCCCCTCCAAAACTTCACTTCCAGACAAAGCCTAAGGGGTGATAGGTTAAGTGATACAT ATTTGTGTATGAAGAAAATTCTTGCAGAGAGAGGCAGCTATATTGTGGATTTTCTTGGCTTGAATAAGAATGACTCCCATGAATGAAATGTATGGGTAGA AGAAAGATTCGTGAGGTGGGGCATACAGTTCATTTTACTTCTTTTCCTATTTTTACTAATTTAACAAATCAAATGTAGTGATATACATTTTTGGACAATA AATTTTATTAGGAATATAGATTTTACATATTATTTATTTGTCTTTATTTATGTATTACTTCAATCGTATTATTCTAATAAGTTTAT
• Tissue: flowers
• Gene name: LI_gene_65273;
• Additional information: details;

Expression of Ll_transcript_172835

FPKM

• FPAB: 3
• FPNAB: 3.3
• LF1: 3.6
• LF2: 3.5
• LF3: 4.2
• LF4: 2.2
• UF1: 1.9
• UF2: 2.3
• UF3: 3
• UF4: 0.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_172835

• Blastp: Protein NRDE2 homolog from Homo with 25.37% of identity
• Blastx: Protein NRDE2 homolog from Homo with 25.02% of identity
• Eggnog: nrde-2 necessary for RNA interference, domain containing(ENOG410XPGD)
• Kegg: Link to kegg annotations (55051)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430340.1)
• Pfam: NRDE-2, necessary for RNA interference (PF08424.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;