| Id Trinity | FTRINITY_DN57040_c6_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_170814 |
| Sequence | AGAAGATCACGTGAGTAACACAAGATAATACAATAAATAAAATAGATAAAGAAAAAGAAAAAGAAAACGAGGGGGAATGAAGAAGGTGTAGTTGTGTTAG GGTGGTTGAAGCGAGAAAAGAGGAGTAAAGAATGGGTGACGTATCTGATGCAACCACCAAGAAGAAGAAGAAGGGTCGTCCTTCTCTTTTAGATCTTCAA AAACGATCTCTTAAAAAACAACAAATTCATTCTCTTAATTCCCATTCTACCCTTCACCATCAAAACGACGACGATGATGAACGTACCCAGAAGAAGCAAA AGCTTTTGATTCGTCTCAATTCCCATCATTCTTTCAATTCCAATATTCAACGCCAAACGGATGGAAAGGTTCTGAAAGTGACTGAGAGTAAAGATGGTTC ACAGGGTGAGTCAGGTCCCACTACACCTTTGCCAGATAAAAAGCTCTTGCTGTTTATCCTTGATAGGCTTCAAAAAAAGGACACTCATGATGTATTCTCT GAGCCGGTGGATCCGGAAGAGCTCCCGGATTACCATGATATCATTAAGAACCCAATGGATTTTGGAACTGTGAGGAACAAATTGGAGGGGGGACTTTATG CCAACTTAGAAAGTTTTGAGAGCGATGTGTTCTTGATATGCTCTAATGCGATGCAATATAATTCTCCAGATACTATTTACCACCGACAGGCCCGAGCCAT GCAAGAGATAGCGAAGAAGGACTTTGAAAATTTGAGACAAGAGAGTGATAGTGATAGTGAACCACAGCCTAAACCACAACACAAGATTGTGCAGAGAGGA AGGCCACCAGGAAAAAACAACATAATAAAGTCACTGACTATGTCTCCTTCGGACTGTGTTGGTCCTGAATCATCCTCTGACGCAACTCTTGCTTCTGGCA GGGATATTGCCAGTGGTTCCAATGTTTATAATCTCAGAAAAGCACTAAGCAAATTTCAGCCTTCAGATTTATCAGGGAGGGCCTCCCATGGCAATTTAAA TAGTGGAGCTTATACTAGTTGGTCGTATGATTGGGAGAATGAGTTTCCAGCTTCTGTTTTAAAAGCTGTGTTAAGGTATGGAAAGAAGCAGTCTGTGGTC GATGATACCAGGCGTGACACTTACAACCATCCAGTCGCATTAAGAAATGAACCACCATTGGTGGCCACAGTTGAAGATGAATTGAAGCAGCTACTTGCTG TATGAATTTCTATTTTTTTTTCTTCTCTCTCTTTTACTTCCCCCAACCACAGAATAAAAACTGGAAGCAAGTTAGGCAAACATCTTCTGTGAATCATTGT AGTTTGAAATTTTTTTAGTCTGTAGGTTGGGTTTCTATCTCATGCTCAGTCAGTTCTGACTGTTTTTTGTTTGCTACAAAATTTGTTTTCATTCTTTTTA CAAACCAGGTTGGTTTACATGTGAAGCATAGTTATGCAAGAAGCCTAGCCCATTTTGCTGCAGATCTTGGTCCTGTTGCTTGGAAGATTGCTGCAAGGAA AATCAGCAGTGTATTGCCACGGGGACATGAATTTGGTCCTGGATGGGTAGCTGAAGATAATGTGTCACAGAAGCAACACTTCCCGGCTTGTGATGATGAG AGAACTTCAGACCCTCCTGTACCAGAGGATTATAAAAGTAGTTTTCTTTCCCCCTCTGGATCACTCCCTGTTGTAAACAGACCATTCTTGCAAAGTGGAG ACATGGTAATGAATAGAGAGTTTAATTGCCAAAATGATTTGAATCCCGTCAACAATATTGGTGGTGGTATTGAATCCATGGTTCCTTCGAGGATGCAACA GGAGTCCATGGTGCGCTCTGATGATTATGGTTCAAATTGTCGACCCGGGACTAATTTTTCACCTCAAATGAAGATGGTAAGACTTGCTGACTTAACTGGA TCAACCAGTTCTGCGAATGTTCCCCAAATGCTCGACATGGATTCCATAAGCAGCCGCATGGTGCCAGCAAATATTAATCAGCCACTTAGAGGGCAGTTCT TAAACCAGCGAAATCAACTAGATTCCAGTAATTTAGTGCCCCTGGAATCTGGATTTGAGTCACAAAGTTTGTCTCAAGGACTTGCTGGAAAATCATCTTG GCAGGGAATGGAAGTTCCCACTAATCAGAGTCCTTTTCCACTTGCTAATGACTTAAATGGGAAGATTGTAGCAACAAATTCAGGTGGTTCCAGTGTGGAG ACTGGTTCTCAGAGGCAGCCAAATTTGGCATTGCAACTATGACAATAAATACTCTCTTTTTTTCTCTTATTTGATTTAAGAATCTTTCAGTAGAGTTATC TTATTTTTATTTTTGACTTTATGGTGGAGGCTGGCATAGGCTATGCCAACATGCTTATAGTTCAGTTTGCATCTTCAATGTACCAAAATTATAGTAATAG TGATGGTGACTGGGTTAGCTATTGCCTATAGCCAATGGCTCAGTGGCTGCAACTTATCTTAGTTACATACACATTTGTAAAGCTTTTAACATGCAATGTT CAACATTCTATAATCATTTATTTTGGAAAAGGTGGTTCATTATTTAAATGACTTCATAGTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65309; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_170814
| Blastp | Bromodomain and PHD finger-containing protein 3 from Homo with 43.93% of identity |
|---|---|
| Blastx | Bromodomain and PHD finger-containing protein 3 from Homo with 45.36% of identity |
| Eggnog | bromodomain(COG5076) |
| Kegg | Link to kegg annotations (27154) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438109.1) |
| Pfam | Bromodomain (PF00439.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |