Ll_transcript_171087

• Id Trinity: FTRINITY_DN57047_c4_g2_i6
• Name Transcript: Ll_transcript_171087
• Sequence: CTTGCAAAATGTAAAAACACCATGAACTAAAAACCCTAGTTCCCAAATTGAAACCAATTTGGATTGAAAACCCTAATTTCCACTTGAATTTCCCCTTAAC GCTATGAGAAACGTTAATTCTTCCAATGCAGGGTCGGAATCATGTCATACCTCCGCAGCACCTCCGACCGCCGGAAATCGGCGTCAAAGGCGACCAGAAG CGCCGTTCACGGTGGCGGAAAATCTAAGATTGTCGTTAACCAGAGGCTGCAGCTGAACCCTGACAAAGATCACCAACCGGAATCGTACGAGGACTTGAAA TCTAATCATTTTGGACCTTGGATTTTCCGTGAGCTCGAAAAGCACCTTCCATCGAACATGCTCAATGCACCTCGCGAGAAAAAGGTTAAGTATATGAGCG GGATCTTGAACGAGTATTTATCTCCCGCAGAACGTTTCAGGGGCCAAAAGCAAAAGGAGTTCAGGCAGAAGATGATATCAAATTATCCGCCTCTGCATAA AGAGTTGTACACTATGGATCCTACAACATTCTTTGTCCCAGAATTTCTGAGAGCAATTAATGATAACACAGAAGACGGCTTTAGGCGAATAATGTCTGAG CCTGCTCCAGGCATTTTTGCATTTGAAATGCTTCAGCCACACTTTTGCGAATTATTGATAGCTGAGTTTGACAATTTCGAGAGGTGGGTTCATGACCAAA AAGTTCGAGTTATGCGTCCCAATACAATGAATCATTATGGTGCTGTACTTGATGACTTCGGCTTTCAAACTATGCTTGCCAAACTTGTGGAAGACTTTAT TTGTCCTTTGTCTAAAGTGTTCTATGCTGAAACTGGTGGAGCAAACCTTGATTCTCATCATGGGTTTATTGTCGAATATGGTAACAACAGAGATGTTGAC TTGGGTTTACATGTGGATGACTCGGAAGTAACCTTGAACGTTTGCTTGGGTACACAGTTTTCTGGAGGAGACTTGTTTTTTCGTGGCATGCGATGTGAGA AGCATGTAAATACAGAAAGTCGCCCAGAGGAGATATTTGATTATTCTCATTTTCCTGGACAAGCTGTGCTTCATCATGGTCGTCATCGTCATGGTGCCAG AGCTACAATTTCGGGTCATCGTGTCAACCTACTTCTCTGGTGCAGAAGTTCTGTTTATAGAGAGATTAGAAAGTATCAAAAAGGTTTCTGTAGCTGGTGT GGTGAGTGCAAGCGTGAGAAGGAAGAAAGGATGCACACACTAATTGATAATACCAAACTGGACTTATCCATGAGAGAAGGTGAACCAGCTATGTAATCTG TTTTGTTCAGTGGATCAATGGATGGTTTGTAAAATGATGCAGCTGTAACTATTTAGTCCAAACAATGAATCTATGCTTCTTGATCCAGGTTCTAACATCT GGAATAGGATAATTTATAGAACTAGATTGAATTCCCCTATCCCTGAAAATTGTTATTATCTTATGTCTTTCAGATTGTATTTAGGTGTATGCATGCAGAG TAAATGCCTTTATTTTGTGATGCACAGAAACCCCAATATCATTGTTAGCATGTATTGCTTAAATCTATTTTGGGGGATAAACTCTTTTTAAAAGTTGATT TTCTTTATGGAGAAAAATATGTATGCACTAACTTTGTAAGAGATTTTTACACTGCCACCGAATTACAATTCATATTTGAT
• Tissue: flowers
• Gene name: LI_gene_65349;
• Additional information: details;

Expression of Ll_transcript_171087

FPKM

• FPAB: 1.1
• FPNAB: 1.4
• LF1: 1.9
• LF2: 1.8
• LF3: 1.6
• LF4: 0
• UF1: 1.2
• UF2: 1.5
• UF3: 1.4
• UF4: 1.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_171087

• Blastp: Uncharacterized PKHD-type hydroxylase At1g22950 from Arabidopsis with 52.75% of identity
• Blastx: Uncharacterized PKHD-type hydroxylase At1g22950 from Arabidopsis with 52.75% of identity
• Eggnog: Procollagen-lysine 2-oxoglutarate 5-dioxygenase(ENOG410Y4QU)
• Kegg: Link to kegg annotations (AT1G22950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444257.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;