Id Trinity | FTRINITY_DN57049_c0_g1_i6 |
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Name Transcript | Ll_transcript_170865 |
Sequence | TGTTTTTTTTTTTTGCCGCACAATTCTCGTCAATGTCGCTCTCCGACGGCGCAGATTGAACGCTGTTGTTGCAAGCCACGTTTTCCCATTTTCCTCTTTC TCTCTTTCTCTCTCTTTCTCTTCAATAATTTTCAATTCCCTTTTCTCATTTCATTTCATTCATTTTTTTCATCTTCTCTCTCTCTCTGAAGAAGCCTCAA TTTCCACTCCGATTTTTATCACACTTTGATCCAATTTTCGGGATGGAAAATAGAGGTGGAACAGAGGAAAATAGAGTCTTTTAATCATTACTGCTTTTTT TGTTTCCAATTTCAGGTTCCCATTTTTGAATTATTTCAAAAAAAATTAATAAATATATTTAATTTTGATTATTTCCATTTTGTATTATTGCATGAATTGA ATTGGTAAAGTTCTTATTTTTAATGTTGTTTTCTTTTATCCTGATTTGCTCATACTTGTTTAGTAATTTTGATGAAGGTGGTGCTGCAATTTGATTGATT TTGATTATTAGGGGTAAAAGGGTTCTCAATTTTGTTGGAAAATCTTCAAATCTTATTGTAGTTGCTCTTTTATGCCTTGTCAATAATCCAAGATTACTTC ATCTGTGTGGTTATATATACAACAAGTGTATCTCTCTTTCGTTGCGAAAGCGTGCGTGATTTCTTGCTGCAGTTCTGAAAATATTGTGTCAACTAGTAAT TGGACGTCAATTTTTGTAATTACATGTTGAAGTTGCTGTTTCCATGAACTTGGGTGACAACAGTGTAGAATGTGGGTTGTTCAGCGATTAGTACTTCTCA GCCTATTACTGTGAAAAGAGTTTGCAGCTTGAGAAGTTGAGAAGGTATTATTTATGGCACTGAATAAGGCAGGAAATCTGTTAGGTTCCAATACTGGGAA GGATCATTGTTTGTTTCGTAATGATGAAATTGCTTGTAGAAGAGTTCCGGTTTCACCTGAGATATTCGGAAAGCATGAAGATAGGTTTGGGTTGAATATG GAGAATGGACACATCAAGTATGAAGGTCTTACAAAAATTTTGGGGTTGAGGAGAATGGAATCCGAGAGTTCTGAGATAAGCGACTTTATTTCTATGAAAG AGCCGACCCAGGAGATGGAAAATGGGGCTTTTGTAAATAGTGTAAGCAAAAGCAATAAAGAAGCCAGTGCTTCCCATTCCTCAAAGAAAGCCGTTGATCA GTCCATTACTGACATATCTGGTCATGGTCCAATTGTGTCCCCCCGTATGCATTATGAATATGAATCTACTTATTCGAATGATCATTCTGGTTCAGGAGTG CTAGATGAATCTCGATCTGGGAAAATGAAGTTTCTATGCAGCTTTGGTGGGAAAATATTACCAAGGCCCAGTGATGGGAAACTCAGATATGTGGGGGGAC AGACTCGAATGATATCAATCCGAAAGGATATCTCATGGGAAGCACTTATCAAGAAGTCTTTGGGTTTTTGCAGCCAGCCTCATACAATCAAATATCAACT TCCGGGGGAGGATCTTGATGCTCTAATATCTGTCTCCTCTGCCGAGGATCTTCAAAATATGATAGAGGAATACCACGGGCTTGAAAGACATGAAGGATCT CATAGGCTTAGAATTTTTTTAGTTCCTTTGGGTGAATCTGAAGAGACATCTCCGTTCGAGGCAAGCAACATTCAGCAGAGTGATCCTGGCTACCAATATG TTGTTGCTGTGAATGGCATATCAGACCCTGCTCCTGGGAAAAGCATTGGAGGGCAGTGTTTGACAAATGAGGCAAGTCAGTTGGATACAAGTTTGAATCT CGCTCCTTCTCCCAATTCCCCTTATACTTCGGATGCCAAGGGTGGCAGTGGTAATGCTTTAAATCCAGATGGAAATTTTAATGATTCGCCGATTCTTCAC AGATCTCCCAATCAATCTCCACTAGTTTCCCCTATTCCAATCGAGGGAAGAGGTTCAAGCATCGGTTATACGCAGTTGCTTTGTAATAATTCATGCCAAG GAAGTATTGAGAGCAATACATCCTTTACCACAGCTCAGCTACAACCGGAGAACTCCAGCACGAGCACTGCTGATTATAGATACCCTCAACAAGTACCTGT GACTATGTTAAGTGACAGTCTCCGTAATCAACACAAAGATGTTGTTAAGCCGGAGAAGCACTATGGAGAGCATTTTGGCAACAGCAATTCCGACAAGGAA TCAGTGATTCCTTTATATATTAATCCAAATGAGGGCTATAGTGATGAACTTTATGGTAAAAAGCCCTTGCATAAGGAAAGAATACTCCACTCTGGAAATC CTCCTTCACGTTTGGATGATGTAATCTGTCAACAGGCTGAATCTGATGGTATTACTTACACCCCTTTTGTACTGCCTCATGCTTTTTCTGATTCGCAGTT GCATGAGAGCGAAACTAGATCTGGTTACTGCTCACAAGAAGGAACTGGCTTATCTTTCTCCTTGAACCATGCAAAGGCTCAGTCATCTTCAATGTTATTG TCTAGTGTCTCACAAGGGGGCCTTATGGAGGTACATAATGATTCCATTCTCCTTTATCCTCAAATACAAAGTATGCTAACAAGTACTACCGAGTCATCCG AGTTGAACAAAAGGCAGGATGTTGCATCCTCTTCTCCATATTCCGAGTCATTCGGAACGAATGATCCCGTTCATAGGGATAACATTTTAATTGGAAAAAA GTACCCTGTTGCTCAAACTAATCTAAGTGGATCTAGCTTTGTAGTGAAGCATGCTGAGGACAATTCTTTGGCTTCAGAAGTGATTAAGAGAACTGAGGAA AAGAATCCTACTGAAATGAAGGATAGAAAAATTTACGAGGGCAAAACACCTGGTGCTAATAGGGTTCATGTCGCTGAATTGAATCTTTTGGACTCCTTCC CATCTAATAATTTGAATGCCAAGGTTAATATGCAAAACGATTGGGAGCTACCTCCTGAGGATAGCATTGCTGTATCATTAGGCACACTGGGAGTCTGCAA CAATAATCACATGGACAAGATCCCTTCTCATCTTGACCAGAGCCGAAGGACTAGTGACAGTAAGAAATGTGCTGTGACTGATGGTTTGAATGATGAACAA GGTACTGGTTTTTCGTTGACAAGAAACTCTGACTCAAATGGCCCAACTTTCAAAGGCGGAGAAACCACTCGTGACAAAATTTCTCTTGGAGATATGTTTG AACTGTCCATTGACTTAGATTCTTATAAAGCTTCACAAGTGCAACATTCCATGAATCCGAAGGGTACAGGTCTTCATGAAAATCCAACTTTAAGCTCTGC ATCTTTGTATCATGCTGTACCTCATGATGGTCATGGTCCAATTTCAAACTTCCCTATGAATCACCAGCCCAGTCCAAAGAAGAATATTTCTTTTAAGAAA ATCCCTTCCTTAATTGATCATGACTCGATAACCAGTCCTGAACAGAAGGTTGATCAGGTTACCAGGGGACATTTTGCTGAAAAATCAAAAGCTGGCGATG TCATGTCGGAGCAATCAAGAAGACCAGAAAAGTGCAATGATGTAAATCAAGTGGAGGCATTTGTTGTAGTAAAAGAAGTGATTAGTGTTGTTCCTCCGGA CATTTATTCTTCTTTGGCAACCACCCCAAATATTGTGGACGAAATTGGAAGTTGTGTTGTATCCTTGTCTCCTATGGAGGAAGAGAGCAACATCCTAGAG TCTGAACCTGAGGATTTTAAAGACGATGAATCAGACAGGAATGAATTCCTTACTGATGCAATGATAGCAGAAATGGAAGCAAGCATCTATGGTTTGCAGA TAATAAGGAATGCTGATCTTGAAGAACTTCAGGAGTTAGGATCTGGTACTTATGGAACGGTTTATCATGGAAAATGGCGGGGGTCGGACATTGCTATTAA GAGAATTAAGAAGAGCTGCTTTGCAGGGAGATATTCTGAGCAAGAAAGATTGACAAAAGACTTTTGGAGAGAGGCGCAAATCCTTTCAAATCTTCACCAT CCTAATGTGGTTGCATTTTATGGGATAGTACCAGATGGATCTGAAGGAACCCTGGCGACCGTAACTGAGTATATGGTTAATGGTTCCCTTAGGCATGTCC TCGTCAAGAAAGATAGATTACTAGATCGTCGTAAAAAGCTAATAATTGCAATGGATGCATCCTTTGGTATGGAATATTTGCATTCAAAAAATATTGTCCA TTTTGATTTGAAGTGTGACAATTTGCTAGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAAT ACCCTGGTATCCGGTGGTGTGCGCGGAACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGTAGCAGCAGCAGGGTTTCCGAAAAGGTTGATGTTTTCT CATTTGGTATCTCAATGTGGGAGATATTGACCGGAGAAGAACCTTATGCAGATATGCATTGCGGCGCCATTATCGGGGGAATAGTAAAGAACACTCTTCG ACCACCTATTCCAAAACATTGCGATGCCGAATGGAGGAAGCTCATGGAAGAGTGTTGGTCACGTAATCCAGAAAGCCGACCGTCGTTCACGGAGATAACA CGCAGGTTGCGATCTATGTTTATGACCCTTCAAGCAAAGGGATTGTCAGTTAAGGCCTAGTGCTTCTTCTTGAAACCAAGGCATATTTTTTGCAGTTATG ATTGTTATTACAAGACCTTATTTTTGAAGAATGATAGGGATTGAAGGGTTAGCATAATAGTTGCCAATTGTTTCTTCTTATTTTGGTTTAGACATGATAT CTATTCTTGTAAATGTTGGAAATTGAGATCATGATAATATGGTTGATTGTATCTCTCAAGTTTTTTTACGGTCTGTTTGCGAGTTGGATTTTGGAATAGA ATAGAATAGAATGGAAGGAAAGGAAAGGCTTCAGAGCTATATGACAAGTGTATTTCATGACTTTCGAGTCTTCCATTTCTCTTTCTTTCCCTCCAAAATT CAACTCCCGAACCGACTCTTAGTATATATATAGAGAâBLAST |
Tissue | flowers |
Gene name | LI_gene_65373; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_170865
Blastp | Serine/threonine-protein kinase EDR1 from Arabidopsis with 36.95% of identity |
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Blastx | Dual specificity protein kinase splA from Dictyostelium with 38.52% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT1G08720) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463733.1) |
Pfam | PB1 domain (PF00564.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |