| Id Trinity | FTRINITY_DN57055_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_172159 |
| Sequence | TGACCAATGAATAAGTTAGCGGTGACCGTGATTTGATTTTGGGTCTTTTCTTTTTCATTCTTCACCAATATCTATTCCTACCTCTCTCCGGCCACCGTCT CCGGCCACCGTCTCTGGCGGAGCTCCGTTCTTTCCTTAAATCGTTTCCGATTTGTAGAAAGCTCGCTGCTTCCGTGGTTTCGGCGACACCATCATGGACA AGGTCTTCAATAAGCTTCGCAATTTGGACGCATACCCAAAAATCAATGAAGATTTTTATAGCCGTAGACTCGCCGGAGGTCTCGTTACTGTCATCTCCGC CGCCTTCATGCTCTTCCTCTTCTTTTCCGAGCTAAGATTATATCTCTATTCAGTTACAGAGAGTAAGCTTTTGGTGGATACTTCAAGAGGAGAAAAGTTA CACATTAATTTTGATGTGACTTTTCCTGCTGTTCGTTGTTCAATGCTCAGTCTAGACTCAGTGGATATTAGTGGCGAGCAGCATTTTGATATACGACATA ATATAATGAAAAAGAGAATTGATGCTAATGGTACTGTGATCGAAGTGAAGAAAGATGGACTAGGTGCACCAAAGATTGAGAGGCCCTTACAGAAACATGG TGGCAGACTAGGACATGATGAGGAGTATTGTGGTTCATGTTTTGGCGCAGAAGAGTCCGATCATCACTGTTGTAATTCTTGTGAAGAAGTGCGTGAGGCA TATAAGAAAAAAGGTTGGGCACTGACAAATACGGATTTGATTGATCAGTGTAAAAGAGAAGGTTATGTGCAAAGAGTAAAGGATGAAGAAGGTGAAGGAT GCAATATTCATGGATCTCTAGAACTTAGTAAAGTGGCTGGAAATTTTCATTTTGCAAATGGGAAAAGCTTTCTTAATACAGGCATCTTTCTAATCGATCT GCTTGGTTTACAGGATAATAATATTAATATAAGCCATCAGATCAATAAATTAAGCTTTGGTGACCACTACCCTGGATTGGTAAATCCTCTTGATGGGGTA AAATGGGAGCAGGGAGCAACTCATGGCATGTATCAGTATTTCATAAAGGTGAGCCTCGATGAAATGGTAAAATTGCTGCTTAGTAATTATGAGGTCATGA GTTCAAATCCCGGAACAACCTCTCCACCTACGGGAGTAAGGCTGAAGGTTATGTATATCTACCTTCTATAGATCCTACGAGGTGAGAGTTTCATGCATTG GGTTGCCTTTTGTTCGTGCGCTATATCCACGTTGATATGAACTTTTATTGTGCTATACTGCTATTACCGTGTTCCTTCTTACAGGTGCACTTCTAATAAC ACGATGTTGCATTCATTTCACAACCGCTGGTCCTGCATTTGTCTTGCACACACCATAAGAGACAACCAGAAAATGAACATAGAATATATCCTTTGAAATA TTGCATCCAATATTGTTTTATGCTTTCAAACTATTTGAACATTTTCTGTATGCACATATGAGCTGAGTTGATTCTTTTGTGCATGTTTCTGTGAACACAT TGCAGGTGGTCCCTACAATATACAAAGACATTAGAGGTCGTGTTATCAATTCAAATCAGGTAGTGTCAAATATCATACTATTTTGTATATGTTCAGTAAA ACTAGCTTGTAGCATGTAGCTGTGAGCTTGTAGTATGTAGCTGTAAAGGTAGCCAGAAGCTTGTAGCTGTGTAGTTAGTTTATTGAATTAGAGCTGTTCG GTAAAACTAGATGTGAAAGTAGCTGAAATTTGTTAAATGACTTAAAAGGACGTATATTATTTATTTATTAGTTTATAATTATTAATTGGAGTAATGAAAT ACATATGTAATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65443; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_172159
| Blastp | Endoplasmic reticulum-Golgi intermediate compartment protein 3 from Silurana with 45.85% of identity |
|---|---|
| Blastx | Endoplasmic reticulum-Golgi intermediate compartment protein 3 from Silurana with 45.85% of identity |
| Eggnog | Endoplasmic reticulumgolgi intermediate compartment protein(ENOG410XP7X) |
| Kegg | Link to kegg annotations (407904) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426306.1) |
| Pfam | Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) (PF13850.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |