Ll_transcript_172160

• Id Trinity: FTRINITY_DN57055_c1_g1_i8
• Name Transcript: Ll_transcript_172160
• Sequence: CGGGCGGATGACAATGTAAAAATTAACTCAATCACCATTAAGACCAAATAAGCCTTTAAATGATTCAGATTGAAAAATCAGGTGCATGTCCGAACGACAC AATTTGGACTCAATTGACCATTGAATAAGGTTGTAGTGACCGTCATTTCATTCCAACTTTGGTTCTTTTCCTTTTCATTCTTCACCAAAATCCCATTCCT TTCGCCCCAACCTCTCTCCGGCCACCGTCTCCGGCGGAGCTCCCGTGGTTTTGGCGCCATCATGGACAAGGTCTTCAACAAGCTTCGCAACTTAGACGCG TACCCAAAGGTCAATGAAGATTTTTATAGCCGCACTTTCGCCGGAGGCGTCGTTACCGTCGTCTCCGCCGCCGTCATGCTCTTCCTCTTTCTTTCCGAGC TAAGATTATACCTCTATACGGTTACAGAGAGTCAGCTTTTGGTGGATACTTCAAGAGGAGAAACCTTACACATCAATTTTGATGTCACTTTTCCGGCTGT TCGATGTTCAATGCTCAGTTTAGACTCAAAGGATATTAGTGGGGAAGAACATTTTGATATACGACATAATATAATGAAAAAGAGAATTGATGGTAATGGT AATGTCATCGAAGTGAAGAAAGATGGACTTGGTGCACCGAAGATTGAGAGGCCCTTACAGAAACATGGTGGCAGACTTGAACGTGATGAAGAGTACTGTG GTTCATGTTTTGGTGCAGAAGAGTCAGATCATCACTGTTGTAATTCTTGTGAAGAAGTGCGTGATGCGTATAAGAAAAGAGGATGGGCTTTGACAAATGC GGATTTGATTGACCAGTGTAAACGAGAAGGTTATGTTCAAAGCGTAAAGGATGAAGAAGGTGAAGGATGCAGTATTCATGGATCTCTTGAACTCAGTAAA GTGGCCGGAAATTTTCATTTCGCGATTGGGAAAAGCTTTCTTCATTCAGCCATCTTTCTAACCGATCTGCTTGCTTTGCAGGATAGTCATTTTAATATAA GCCATCAGATCAACAAATTAAGTTTTGGTGACCACTACCCTGGATTGGTAAATCCTCTTGATGGGGTAAAATGGGTGCAGGGAGCAACTCTTGGCATGTA CCAGTATTTCATAAAGGTGGTCCCTACAATATACAAAGACATTAGAGGTCGTGTTATCAATTCAAATCAGTATTCCGTGACCGAGCATTTCAAGAGTACA GCAGAAGGTGCATTCCCTGGAGTTTTCTTCTTTTATGACATATCTCCAATCAAGGTCACCTTTGAAGAGGAACATCTTCCATTCTTACACTTCTTGACCA ATATTTGTGCAATTATTGGAGGTATTTTCACAATTGCTGGAATAGTAGATTCATCAATATATTATGGTCAGAGGACAATCAAGAGGAAGAGGGAGATTGG CAAGTATACATGATGTGATCATTATCTTTAACAAGAGCTCTAATGTGTTGGCTGATGCAATGCTCCATATGTGATGGTACTAACACATTGATATTTAAGC TTTTGGAATCAGCATCTCCGCATGCGGAGATAAGGCTGCGCGCAGCAATCTTACTCGGATCTTACTAAATGAGATCCTCGTGCATTTTGGACTATCATTT TTTAATAACATGTATGCTGTAATCTACCCAACATTTTCATGATATTTGAAGAAAATTGAAGATGTTAAGTTAATGATGCTATGTCCCTGCTTATGATGCC ATGTTTTTTTGACGTAAAACTAATCTAAAAGAACAACCAAAGGCATTGATTATAAGCAATGGATGATATTATTGGCATTTCAACATATTTATTCCCTGTT GTCATTGATTAATTATAATTTAGAATAAAATATCCTGTTACAAGGAG
• Tissue: flowers
• Gene name: LI_gene_65443;
• Additional information: details;

Expression of Ll_transcript_172160

FPKM

• FPAB: 1.7
• FPNAB: 5.8
• LF1: 4.7
• LF2: 0.3
• LF3: 5.1
• LF4: 2.2
• UF1: 5
• UF2: 1.7
• UF3: 5.9
• UF4: 9.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_172160

• Blastp: Endoplasmic reticulum-Golgi intermediate compartment protein 3 from Xenopus with 46.92% of identity
• Blastx: Endoplasmic reticulum-Golgi intermediate compartment protein 3 from Xenopus with 46.92% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (447415)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433349.1)
• Pfam: Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) (PF13850.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;