| Id Trinity | FTRINITY_DN57057_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_173134 |
| Sequence | CATGACCCTAAAACCCAAAACCCTATTTCTGACTTCCCTCTTCTTCGTATTCATTATCCTATGCTTCATTTCTCATCTCACTCCTTTCATATACACACAA ACACTTTCGCACTATACACCACAAAACCTCTATTTCAGAATTTGATGGAAGCATAGAACGTTAATAAGACGGTTATGGAGAGAGAAAATGGAGAAGCGTG TAAGCAATTTCCATCTCATGGTGGAAAAAGCTTATTGACCGTTGCTGCTATTAGGAGGAAGCATTTAGAGGAAGAGATGAACGTTAATGCAACCTCTTCT TCGTGTTCTAGAAGGAATAATAAGCGTAACGGTTTTCAGGAGCAGTTATTAACACAAGATTATGCTTCAAACGATGTGTTCCGTGATTTTGATTTTCTAC CTTCTGGGCCCAAAAATTATGTTCCTTATTGTCCAGAGAACCAAGGACCCACCAAAAGGAAGAAGGTTTCCAAGAATGCAATTGTGAGTCATCCTGATTG TAATATGGAAGTGCCTGTGAAGAAACATGGTCGTGGAAAGGGTTTAATGACAGTTTGGAGGGCAGCAAATCCTGATGCTGGTGACCTTCCAATTGGATAT AGTTTGTCCGGCCAAGAAGTTCGTCTAACCTCAAATTCTATTCTACAGAAACCACTCTCTGATAACAAGAGGTCACGAAAAACAGTAACCACAAATGGAA TGCTAAAAAATAAAATTCAGAATAAGAGAAATAAATTACAGGATAAGAGGAATCTTGCAATTCAAAGAAGAGTGGGGGAATCTAACCAATATGTGAGTCA GATCCAGCTACTGAAGGAAAAATGTGATCTTGCTTTGGATAGTGCAATATCTACGGAGGTAGTTGATCGAATTTCGATGTTAATCGATGATGAAGAGCTA GAGCTGAGAGAGCTACAAGCTGGGAATGACCTGCTTATGTGTTCTGACCATCTTGCTACCAGTGGAATGCTTGGTTGCTCACTTTGTAAAGATGTGCTAG TTAAGTTCCCCCCGGATACTGTCAAGATGAAGAAACCTATCTGTTTGCAACCTTGGGACTCCTCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTCCA TTTCCTCTATACATATGCGATAGTTGTTGATACATGCCCCTTCACTCTTGACGAGTTTGTTCAAGCATTCCATGATAAGGACTCAATGTTACTTGGAAAG ATTCATGTAGCCCTTCTTACTGTTCTTCTATCTGACATTGAAGTGGAACTTACTAATGGGTTTTCACCTCATTTAAATAAGTCATGCAACTTTCTTGCAC TGCTTCACTCGGTTGAAAGTCAAGAATGTTCCCTGAATTTCTGGAGAAGATCGCTTAATCCTCTTAGTTGGATTGAAATACTGCGTCAAGTTCTGGTTGC TTCTGGATTTGGTTCAAAGCAAGGTGCTTTACGCAGAGAGACCCTTAGCAAGGAACTGAATCTTCTTGTAAACTATGGCCTACGCCCTGCAACCTTGAAG GGTGAGTTGTTTAAAATCTTGTTAGAGCATGGAAACGATGGATGCAAAGTATCCAAGCTAGCGAAGTCAATGCCGATTGCAGAATTAGACCTTGTCAGCA CAACAGAAGAGCTGGAGTCCTTAATATGCTCGACACTTTCCAGTGATGTTACCTTATTTGAAAAGATTTCATCATCGGCATATCGGTTGCGTATGAGCAC TGTTACAAAGGACAGTGATGAATGTGAGTCAGATATGGATGACTCTGGGAGTGTTGATGATGAACTTAATGACAGTGATTCATGTAGCAGTGGTGATGAT TTTGCAAGTGATTCAAGAATCTCCAATATAAGAAAACTGAGGCGTGGAAAAAATAATATGCTGAAAGTGTACACTGAAATTGATGAGAGCCATCCAGGGG AAGTGTGGTTGTTAGGACTTATGGACAGTGAGTATTCAGATTTGAACATTGAAGAAAAATTGAATGCATTGGTGGCTCTAACTGATCTTCTTTCATCTGG ATCCAGCATCAGGATGAAGGTAAAATACTGACTATCTTGTGAAATGTTATATTTAGGCCTTGGATTGTCTCCCCCTCTTAAATTTGAAGCAAAATTTGAA TTAATAAAAAAGATGCCCTAAAATGTAATTTTGTGAACTGATCTTATCCTATAAAGTTCTAAATGATATCTTCACAGGATCCAATGAAAGTTACAGCTGA TTGCAATTCTAGCATCCCATTATGTGGTTCAGGAGCAAAAATAAAGAGATCAGTAGTAAAGAAGCGTGGGCCATTTTGGAACCAGACTGCACAAATGCAA TATGTTAAAGAAGCACACTCTATTTTTCATCCAAGTCCAGTAGATTCCTCATCATTAAATTCAAATGTTAATAATCATGAGGGTTCCTTTGAGAAGGGAA TAGATTCAAGTGGTTCACATCCCATTCAATCAGTGTTTTTGGGATCTGATCGTAGGTACAATAGATATTGGCTTTTCTTGGGCCCTTGCAATGCAGATGA TCCTGGCCACAGGAGGGTTTACTTTGAATCTTCTGAGGATGGTCACTGGGAGGTGATTGATACTGCAGAGGCCTTGTGTGCCTTGGTGTCAGTACTAGAT GATAGAGGGAAACGGGAGGCTTTTCTTATTGAATCTTTGGAGAGACGGCAAGAACCTCTATGCAGATCTATGTCTAGGATTAAGGTTAATTGTACTGGAA TGAGGTGTATGTCACGTTCTGATCAATCTGAGCAGGATATGGTCACAGAAGACAGTTACTCTCCTATATCTGATGTAGACAATCTGAATCTGACTGAGAC TGCCCAAGACTCTTTGCCTTCAGCTGGGGCTGTGGTAATTGCAGCTGGAAAGAAAGGAGAGGAACAAGAGCAAAAATGGCTCCGTATTCAAGAATATGAT TCTTGGATTTGGAGTTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGTAGAAGGTCATATCTTGACTCTCTAGCCAGATGTAAGAGTTGTCATGATC TTTACTGGAGAGACGAGAGACACTGCAAAATTTGCCACATGACATTTGAGCTTGATTTTGATCTAGAAGAAAGGTATGCAGTCCACATAGCCACATGCAG GGAGAAAGAAGACAGCAATATATTTCCAAATCATAAAGTCTTGTCATCACAGATTCAATCACTGAAAGCTGCAATATATGCTATTGAGTCTGTTATGCCT GAAGATGCCCTGGTGGGTGCTTGGAGGAAGTCTGCTCATAAGCTCTGGGTCAAACGACTCAGACGCACCTCAACTTTAGCGGAGCTTATGCAGGTTCTTG CTGATTTTGTTGGTGCCATCAATAAGGACTGGTTGTTTCAATGCCACTTTCCTGATGGTGTGGTTGAAGAAATCATTGCATGTTTTGCATCTATGCCCCA AACATCATCTGCCCTTGCTCTGTGGTTAGTGAAGTTAGATGTCATAATTGCTCCCTACTTGGACCGAGTCCATCCTCAGAAGAAGCAAGGAATCAGTAAG CATGGTGCTTGCTGATTGGCCTACCTACATTTATACAAGTAAACACATGCATATTTTTTTGGAAGTGAAACTATAGAACTACACGTTCTGCACCTTGATT TGATCACAGATACATTTTCTGGCTCCCCAGTTGGTTATGAATTCAGCTTGACTTCAATTTGGCAGAGGCAATATTGTGTGCATGTCAAAATAAGTCCTTT TTTCATTCAAATTCTCCCTATAAAAGTTTGTATATACAGGCAATCCTGTTTATCATGTACAGCTTTAGATTAGATAAAACACTGCAACTTGAGTTTTTTT GGCGCATGAGGCCACCCTTGTTTCTTGCTTTATGGTATTTTTCTTTAGAGAAATCAATTTTGTCTCTGTATCTTTCAGAATGATGTCTGTACTGGTAGAA TAATAATTTGTATTGAGGATTACTGTTAGTGGCCATTTATAGAAGAAAATGATAATGATGTGAATAATAATTTTCAGCTTTTACTTGCTTTTTGGTAAGA CCCAAAATTTGGAATTGGTTAAGGTATTATCCAAATGGCTTATAGAATGGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65451; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_173134
| Blastp | Homeobox-DDT domain protein RLT3 from Arabidopsis with 47.49% of identity |
|---|---|
| Blastx | Homeobox-DDT domain protein RLT3 from Arabidopsis with 55.8% of identity |
| Eggnog | NA(ENOG410YDFQ) |
| Kegg | Link to kegg annotations (AT4G12750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421856.1) |
| Pfam | DDT domain (PF02791.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |