| Id Trinity | FTRINITY_DN57057_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_173135 |
| Sequence | ATATTTCATTACCTTAAAACCCAAAACCCTATTTCTAATACTCTCTCATATTATCCTCTGCTTCATTTCTCATTCCATTTCATGCACAAACACCTCACTA ATTCAGAGTTTGATGGATGCTTAGCACTCGAAGTCGGTTATGGAGAGAGGAAACGGAACAACGTGTAAGCAATTTCCATCTCATGGCGGAAAAAGCTTAG TGACAGTTGCTGCTATTAGGAAGAAGCATTTACAGAAAGAAATTAACGTTGTTAATGCAACTTCTTCATATTCTGTGAAGAGTAAAAAACGTAACGGTTT TCAGGAAGAGCTATTAGCTGAAGATTGCATTGCAAACAACGTTTTTCGTAGTGATGGTCCTGCTCTTGGTCACGATTTTGACTTTCTTCCTTCTGGGCCC AAAGATTACATGCCTGCTTGTCCAGAGAACCAAAGACCCACCAAAAGGAAGAAGGTTTACAACAGTGCAATTGTAAGTCATCCTGATTGTAATATGGAAG CACCTGTGAAGAAACATGGTGTTGGCAAGGGATTGATGACAGTCTGGATGGCAACAAATCCTGATGCTAGGAACCTTCCAATTGGATATGGTTTGGTCGA CCAGGAAGTTCGTCCAACCTCAAATTCTATTCTACATAAACCAGTCTGTGATAAGAAGAGGTCTCGGAAAACAGTAACCACGAGCGGAATGCTAAAAAGT AAAATGCAGACTCAGAAAAATAAATTACAGGATAAGAGGAATTTTGCCATTCAAAGACGAGTGGGGGATTCTAATCAGTATGTGAGTGAGATCCAGCTAC CGAAGGAAAAATGTGATCTTGCTTTGGATAGTGCAACATCTGCGGAGAGAGTTGATCGAATTTCGATGCTAATCGATGATGAAGAGCTAGAGATTAGAGA TTTACAAGCTGGGACTGACCTGCTTATGTGTTCTGAGCATCTTGCTACCAGTGGAATACTTGGCTGCTCACTTTGTAAAGATGTGCTAGTTAAATTTCCC CCAGATACTGTCAAGATGAAGAAACCTATCTGTTTGCAACCTTGGGACTCCTCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTTCATTTCCTATATA CATATGCTATAGTTGTTGATACATGCCCCTTCACTCTTGACGAGTTTGTTCAAGCATTTCATGATAAGTGCTCAATGTTACTTGGAAAGATTCACGTGGC CCTTCTTACAGTTCTTCTATCTGACATTGAAATGGAGCTTACTAATGGGTTTTCATCTCATTTAAATAAGTCATGCAACTTTCTTGCACTGGTTCACTCG GTCGAAAGTCAAGAATATTCCTTGAATTTCTGGAGAAAATCTCTTAATTCTCTTACTTGGATTGAAATACTCCGTCAAGTGCTAGTTGCTTCTGGATTTG GTGCAAAGCAAGGTGCTTTACAGAGGGAAACCCTTAGCAAGGAACTGAATCTTTTTGTAAACTATGGCATACGTCCTGCAACCTTGAAGGGCGAGTTGTT TAAAATCTTGTTAGAGCGAGGAAACAGTGGATGCAAAGTATCCGAGCTAGCAAAGTCAATGCAGATTGCAGAATTAAACCTTGTCAGAACAACAGATGAG CTGGAATCGTTAATATGCTCGACACTTTCTAGTGACGTTACTTTATTTGAAAAGATCTCATCATCAGCGTATCGGTTGCGAATGAGCACTGTTACAAAGG AGAATGGTGAATTGGAGTCAGATATGGAGGACTCTGGGAGTGTTGATGATGAACTCAATGAAAGTGATACATGTAGCAGCGATGATGATTTTGAAAGTGA TTTAAGAATCACCAATATAAGAAAATTTAAGCGTGCAAACAGTCACAAAATTATAAACAATATGCTGAAAGTGTACACTGAAATTGATGAGAGCCATCCA GGGGAAGTGTGGTTGTTAGGACTTATGGAAAGCGAGTATTCAGATTTGAACATTGAAGAAAAATTGAATGCATTGGTGGCTCTAACTGATCTTCTTTCAT CTGGATCCAGCATCAGCATGAAGGATACAATGAAAGTTACAGCTGATCACAGTTCTAGCATCCAGTTACGTGGTTCAGGAGCAAAAATAAAGAGATCAGT AGTAAAGAACCCCAGGCCAGTTTCGAACCAGACCGCACAAATGCAATGTGCTAAAGAAACAGATTCTATTTTTCATCCCAATCCAGTAGATTCCTCATCA TTAACATTAATCTCAAATGCCCATAGCCATGAGGGTTCCTCTAAGGGAATATATTCAACTGGTTCACACCCCACCCAATCAGTGTTTTTGGGATCTGATC GTAGGTACAATAGATACTGGCTTTTTTTGGGCCCTTGTAATGCAGATGATCCTGGCCATAGGAGGGTTTACTTTGAATCTTCCGAAGATGGTCACTGGGA GGTGATTGATACTGAAGAGGCCTTGTGTGCCTTGGTATCAGTTCTAGATGATAGGGGGAAACGGGAGGCTCTTCTTATTGAATCTTTGGAGAGACGACAA GCATCTCTATGCAGATCTATGTCTAGGATTAAGGTTAATAGCACTGGAATGAGGTGTATGTCACATTCTGATCAATCTGAGCTGGATATGGTCACAGAAG ACAGTTACTCTCCTATATCTGATGTAGACAATCTGAACGTGACTGAGACTGCTGAAGACTCTTTGCCTTCAGCTGGGGCTGTGGTAATTGCAGCTGGAAA GAAGGGAGAGGAAAAGGTGCAAAAATGGCTCTGCATGCAAGAATATGATTCTTGGATTTGGAGTTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGT AGAAGGTCGTATCTTGACTCTCTAGCGAGATGTAGGAGTTGTCACGATCTATACTGGAGAGACGAGAGACACTGCAAAATTTGCCATATGACATTTGAAC TTGATTTTGATCTAGAAGAAAGATATGCAATCCACATAGCCACATGCAGGGAGAAAGAAGACAGCAATATATTTCCAAATCATAAAGTCTTGTCATCACA GATTCAATCACTGAAAGCTGCAATTTATGATATTGAGTCTGTTATGCCTGAAGATGCCCTGGTCGGTGCTTGGAGGAAGTCTGCTCATAAGTTATGGGTC AAACGACTCAGACGCACCTCCACTTTAGTGGAGCTTTTTCAGGTTCTTACTGACTTTGTTGATGCCATCAATGAGGACTGGTTGTTTCAATGCCACTTTC CTGATGGCGTGGTTGAAGAAATCATTTCATCTTTTGCATCTATGCCTCATACATCATCTGCCCTTGCCCTGTGGTTGGTGAAGTTAGATATCATAATTGC TCCGTACCTGGACCGATTTCATCATCAGAAGAAGCATGGAATCAGTAAGAGCTAATGGCTTCCTAAGTACAAGAAATAAAAGTTATAATCACATGGTAAG CATGGTGTTTGCTGATCGGCGTACTTACTTCTATACAAGTAAAACACATTGGAATTGAAATTGTGGTACTACCCGTTCTGCACCTTGATTTGATCAGAGT AATATATGTTGGCTCCACTTGGTTCTCAAATCAGCGTGACTACAATTTGGCAGAGGCATTGCATGTCAAAATAAGTCATTTTCTTCCCATTTTTTCCTCT TAAAAGTTTGTATATACAGTTACTCCTGTTGATTATGTACAGCTTTAGATTAGATAAATAATGGGCAACTTGAGTTTTTTGGCGCGTAACCCCAGTTAGT TGCTATGAGGCCACCCTTATTTGTTGTTTTATGGTGTTTTCTTTATAGAAATCAATTTTGTCGTTGTATTTTGCAGAATGATGTCTGTACTGATGAATAA TAATTTGTGTTGAGGATTAGTGTTTCAGGCCATTTATCGAAAAAAATGATAGTGGTGTATAATTTTCAAAAAAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65451; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_173135
| Blastp | Homeobox-DDT domain protein RLT3 from Arabidopsis with 49.47% of identity |
|---|---|
| Blastx | Homeobox-DDT domain protein RLT3 from Arabidopsis with 49.47% of identity |
| Eggnog | NA(ENOG410YDFQ) |
| Kegg | Link to kegg annotations (AT4G12750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446445.1) |
| Pfam | DDT domain (PF02791.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |