| Id Trinity | FTRINITY_DN57057_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_173142 |
| Sequence | ATATTTCATTACCTTAAAACCCAAAACCCTATTTCTAATACTCTCTCATATTATCCTCTGCTTCATTTCTCATTCCATTTCATGCACAAACACCTCACTA ATTCAGAGTTTGATGGATGCTTAGCACTCGAAGTCGGTTATGGAGAGAGGAAACGGAACAACGTGTAAGCAATTTCCATCTCATGGCGGAAAAAGCTTAG TGACAGTTGCTGCTATTAGGAAGAAGCATTTACAGAAAGAAATTAACGTTGTTAATGCAACTTCTTCATATTCTGTGAAGAGTAAAAAACGTAACGGTTT TCAGGAAGAGCTATTAGCTGAAGATTGCATTGCAAACAACGTTTTTCGTAGTGATGGTCCTGCTCTTGGTCACGATTTTGACTTTCTTCCTTCTGGGCCC AAAGATTACATGCCTGCTTGTCCAGAGAACCAAAGACCCACCAAAAGGAAGAAGGTTTACAACAGTGCAATTGTAAGTCATCCTGATTGTAATATGGAAG CACCTGTGAAGAAACATGGTGTTGGCAAGGGATTGATGACAGTCTGGATGGCAACAAATCCTGATGCTAGGAACCTTCCAATTGGATATGGTTTGGTCGA CCAGGAAGTTCGTCCAACCTCAAATTCTATTCTACATAAACCAGTCTGTGATAAGAAGAGGTCTCGGAAAACAGTAACCACGAGCGGAATGCTAAAAAGT AAAATGCAGACTCAGAAAAATAAATTACAGGATAAGAGGAATTTTGCCATTCAAAGACGAGTGGGGGATTCTAATCAGTATGTGAGTGAGATCCAGCTAC CGAAGGAAAAATGTGATCTTGCTTTGGATAGTGCAACATCTGCGGAGAGAGTTGATCGAATTTCGATGCTAATCGATGATGAAGAGCTAGAGATTAGAGA TTTACAAGCTGGGACTGACCTGCTTATGTGTTCTGAGCATCTTGCTACCAGTGGAATACTTGGCTGCTCACTTTGTAAAGATGTGCTAGTTAAATTTCCC CCAGATACTGTCAAGATGAAGAAACCTATCTGTTTGCAACCTTGGGACTCCTCTCCAGAAATTGTGAAGAAATTATTTAAGGTGCATATAACCAATCACC TATGACTCCTCTCCAGAATGCGCATGTTTTTTTCTGAGCAATGACATTATTACACCTTTTTATCTCACACTTCTTCTTACCCTCCATCTTTCTTCCTTTC CCATCACATCACCAATCACGAGACTTCCTATCTTTCTTTTTCCTACACCAACTACACCCGAAAAGGTTTTTCATTTCCTATATACATATGCTATAGTTGT TGATACATGCCCCTTCACTCTTGACGAGTTTGTTCAAGCATTTCATGATAAGTGCTCAATGTTACTTGGAAAGATTCACGTGGCCCTTCTTACAGTTCTT CTATCTGACATTGAAATGGAGCTTACTAATGGGTTTTCATCTCATTTAAATAAGTCATGCAACTTTCTTGCACTGGTTCACTCGGTCGAAAGTCAAGAAT ATTCCTTGAATTTCTGGAGAAAATCTCTTAATTCTCTTACTTGGATTGAAATACTCCGTCAAGTGCTAGTTGCTTCTGGATTTGGTGCAAAGCAAGGTGC TTTACAGAGGGAAACCCTTAGCAAGGAACTGAATCTTTTTGTAAACTATGGCATACGTCCTGCAACCTTGAAGGGCGAGTTGTTTAAAATCTTGTTAGAG CGAGGAAACAGTGGATGCAAAGTATCCGAGCTAGCAAAGTCAATGCAGATTGCAGAATTAAACCTTGTCAGAACAACAGATGAGCTGGAATCGTTAATAT GCTCGACACTTTCTAGTGACGTTACTTTATTTGAAAAGATCTCATCATCAGCGTATCGGTTGCGAATGAGCACTGTTACAAAGGAGAATGGTGAATTGGA GTCAGATATGGAGGACTCTGGGAGTGTTGATGATGAACTCAATGAAAGTGATACATGTAGCAGCGATGATGATTTTGAAAGTGATTTAAGAATCACCAAT ATAAGAAAATTTAAGCGTGCAAACAGTCACAAAATTATAAACAATATGCTGAAAGTGTACACTGAAATTGATGAGAGCCATCCAGGGGAAGTGTGGTTGT TAGGACTTATGGAAAGCGAGTATTCAGATTTGAACATTGAAGAAAAATTGAATGCATTGGTGGCTCTAACTGATCTTCTTTCATCTGGATCCAGCATCAG CATGAAGGATACAATGAAAGTTACAGCTGATCACAGTTCTAGCATCCAGTTACGTGGTTCAGGAGCAAAAATAAAGAGATCAGTAGTAAAGAACCCCAGG CCAGTTTCGAACCAGACCGCACAAATGCAATGTGCTAAAGAAACAGATTCTATTTTTCATCCCAATCCAGTAGATTCCTCATCATTAACATTAATCTCAA ATGCCCATAGCCATGAGGGTTCCTCTAAGGGAATATATTCAACTGGTTCACACCCCACCCAATCAGTGTTTTTGGGATCTGATCGTAGGTACAATAGATA CTGGCTTTTTTTGGGCCCTTGTAATGCAGATGATCCTGGCCATAGGAGGGTTTACTTTGAATCTTCCGAAGATGGTCACTGGGAGGTGATTGATACTGAA GAGGCCTTGTGTGCCTTGGTATCAGTTCTAGATGATAGGGGGAAACGGGAGGCTCTTCTTATTGAATCTTTGGAGAGACGACAAGCATCTCTATGCAGAT CTATGTCTAGGATTAAGGTTAATAGCACTGGAATGAGGTGTATGTCACATTCTGATCAATCTGAGCTGGATATGGTCACAGAAGACAGTTACTCTCCTAT ATCTGATGTAGACAATCTGAACGTGACTGAGACTGCTGAAGACTCTTTGCCTTCAGCTGGGGCTGTGGTAATTGCAGCTGGAAAGAAGGGAGAGGAAAAG GTGCAAAAATGGCTCTGCATGCAAGAATATGATTCTTGGATTTGGAGTTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGTAGAAGGTCGTATCTTG ACTCTCTAGCGAGATGTAGGAGTTGTCACGATCTATACTGGAGAGACGAGAGACACTGCAAAATTTGCCATATGACATTTGAACTTGATTTTGATCTAGA AGAAAGATATGCAATCCACATAGCCACATGCAGGGAGAAAGAAGACAGCAATATATTTCCAAATCATAAAGTCTTGTCATCACAGATTCAATCACTGAAA GCTGCAATTTATGATATTGAGTCTGTTATGCCTGAAGATGCCCTGGTCGGTGCTTGGAGGAAGTCTGCTCATAAGTTATGGGTCAAACGACTCAGACGCA CCTCCACTTTAGTGGAGCTTTTTCAGGTTCTTACTGACTTTGTTGATGCCATCAATGAGGACTGGTTGTTTCAATGCCACTTTCCTGATGGCGTGGTTGA AGAAATCATTTCATCTTTTGCATCTATGCCTCATACATCATCTGCCCTTGCCCTGTGGTTGGTGAAGTTAGATATCATAATTGCTCCGTACCTGGACCGA TTTCATCATCAGAAGAAGCATGGAATCAGTAAGAGCTAATGGCTTCCTAAGTACAAGAAATAAAAGTTATAATCACATGGTAAGCATGGTGTTTGCTGAT CGGCGTACTTACTTCTATACAAGTAAAACACATTGGAATTGAAATTGTGGTACTACCCGTTCTGCACCTTGATTTGATCAGAGTAATATATGTTGGCTCC ACTTGGTTCTCAAATCAGCGTGACTACAATTTGGCAGAGGCATTGCATGTCAAAATAAGTCATTTTCTTCCCATTTTTTCCTCTTAAAAGTTTGTATATA CAGTTACTCCTGTTGATTATGTACAGCTTTAGATTAGATAAATAATGGGCAACTTGAGTTTTTTGGCGCGTAACCCCAGTTAGTTGCTATGAGGCCACCC TTATTTGTTGTTTTATGGTGTTTTCTTTATAGAAATCAATTTTGTCGTTGTATTTTGCAGAATGATGTCTGTACTGATGAATAATAATTTGTGTTGAGGA TTAGTGTTTCAGGCCATTTATCGAAAAAAATGATAGTGGTGTATAATTTTCAAAAAAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65451; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_173142
| Blastp | Homeobox-DDT domain protein RLT3 from Arabidopsis with 53.14% of identity |
|---|---|
| Blastx | Homeobox-DDT domain protein RLT3 from Arabidopsis with 53.85% of identity |
| Eggnog | NA(ENOG410YDFQ) |
| Kegg | Link to kegg annotations (AT4G12750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446445.1) |
| Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 (PF15612.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |