Ll_transcript_172492

• Id Trinity: FTRINITY_DN57058_c2_g1_i13
• Name Transcript: Ll_transcript_172492
• Sequence: ATTCGCTGAAGAGCTTTACAAGGTAAAAATCCGAAATTGGTATCATTATTAGCCTGGGTGAACCATCTACACTTCGTGATTTTGAGATATACTAGTGAAT AGTGGTGTCTATATGTGTAGCTTATATTCTTTGACTTTAGTGCAGATGTGCTTTCCCCATGATTATGCTTGATCTTTTTGTGCCATAGCCTTATTGTATT CTGTCATTCAAAATGACGTGATCTTTTCATCTGAGGACATATAAGGACTTATAATAAGTAGGTAACATTTTATCCGAAAAAATAATATATAGGTAACGGG TGAAGGGGATGACAAATATCTGATTGCAACTTCAGAGCAGCCACTTTGTGCATATCATTTAGATGATTGGATCCACCCTACCCAGCTACCCATAAGATAT GCTGGATATTCATCATGCTTTCGTAAAGAAGCTGGGTCTCATGGCCGAGATACTCTTGGAATATTCCGAGTTCACCAATTCGAGAAAGTGGAGCAGTTTT GCCTTACTAGCCCAAATGATAATGCATCATGGGAAATGCATGAGGAGATGCTAAAAAACTCTGAAGATTTCTACAAAGCACTAAACCTTCCATATCAAGT TGTTTCCATT
• Tissue: flowers
• Gene name: LI_gene_65456;
• Additional information: -

Expression of Ll_transcript_172492

FPKM

• FPAB: 0
• FPNAB: 0.3
• LF1: 0.1
• LF2: 0
• LF3: 0.2
• LF4: 0
• UF1: 0
• UF2: 0
• UF3: 0.2
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_172492

• Blastp: -
• Blastx: Serine--tRNA ligase, cytoplasmic from Arabidopsis with 85.85% of identity
• Eggnog: Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (By similarity)(COG0172)
• Kegg: Link to kegg annotations (AT5G27470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_017411715.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;