Ll_transcript_172486

• Id Trinity: FTRINITY_DN57058_c2_g1_i8
• Name Transcript: Ll_transcript_172486
• Sequence: TGGATACCCTAGCTAAACCCTAATAGATAAGAGATTTCGAAAAAAGAAGAAGAAAACGGCGTAGAGAGAAAGAGAAAAAGAAGAAGAAATGTTAGACATC AATCTCTTCAGAGAAGAAAAAGGTCACAACCCTGAACTCATTCGCGAATCTCAACGACGCCGTTTTGCTAGCGTTGATCTCGTTGATGACGTCATCTCCC TCGACAAAGAATGGCGCAAACGTCAATTCGAGTTGGAGACACTACGAAAAGACGTTAATAGGATTAGCAAGGAATTCGCTAAAATCAAGATTGCTGGTGG GGATACAACTAAGCTCAGTAGTGAATCGGAGGAGACTAAGAAACAGATAGCAGCAAAAGAGGTTGAAGTTCGGGACGCTCTCACGCTCTTGAACTCTAAA TTAGAAACCATTGGAAACCTTATCCATGATTCCGTTCCTGTTAGCAATGATGAGGCCAACAATGCCGTGATTCGAACTTTTGGAGAAAAAAGAGTTGAGC CTAAACTAAAGAATCATGTAGATCTAGTTGAACTCCTTGGAATAGCAGATTTAAAGAGAGGAGCTGACATAGCTGGAGGCAGAGGTTTCTATCTTAAAGG AGATGGAGTTCGTCTTAATCAAGCTCTAATAAACTTTGGCCTTGATTTCTTGGAGAAAAGGGATTATACTTTATTGCATACTCCTTTCTTCATGAGAAAA GACATCATGTCAAAGTGTGCTCAACTAGCCCAATTTGATGAAGAACTTTACAAGGTAACTGGCGAAGGGGATGACAAATACTTGATTGCAACAGCAGAGC AGCCCCTTTCTGCTTATCATTTAGATGACTGGATCCATCCTACCCAGCTACCCTTGAGATATGCTGGATATTCATCATGCTTTCGTAAAGAAGCTGGGTC TCATGGCCGAGATACTCTTGGAATATTCCGAGTTCACCAATTCGAGAAAGTGGAGCAGTTTTGCCTTACTAGCCCAAATGATAATGCATCATGGGAAATG CATGAGGAGATGCTAAAAAACTCTGAAGATTTCTACAAAGCACTAAACCTTCCATATCAAGTTGTTTCCATTGTATCTGGTGCTTTGAATGATGCTGCGG CAAAGAAGTATGATTTGGAAGCATGGTTTCCAGCATCTCAAACTTATCGAGAGCTAGTGTCCTGTTCAAACTGCACAGACTATCAATCCAGAAAATTAGA AACTCGATTCGGGCAGAAGAAGAGCAATGAACAATTGAAGCAATATGTCCATATGTTGAATTCTACTCTCACAGCTACCGAGAGGACCATATGCTGCATA CTAGAGAACTACCAGAAGGAGGATGGTGTAGAGATACCGGAAGTCCTCATTCCATTCATGGGTGGAAAAACTTTCCTACCTTTCAAGACCAAACCAGTTG CTGAAGCCAAAGGGAAGAAATCAAAGGCCTAATTGCATTATATTTAGTCTGAATGATGATATTTATGAAAAGAGTTAGTTCACAATTGAAGGGCATTGAA ACGTGTTCAATATAATGGAGCTGCATCTACATTGACTTCAATTACAAACTTTTTTGAAAAGAGGAAAACTTTCTGGAAAATTGGTACCAAATTATTCAAT CATGTTTTGTAGTACATTTTGCAGTCAATCTTGTGTTTTGTTCTTAACTGAGGACCACTCAAGTTCATAGGTTTTTAAGCAGCCTTTGTTATGAATTTGT TGTTTTTTCTACCTTTTATTTAAAGAAACTCTAAACAAATGTATTTGTTTTTAAAATAATGTGTGGTTTCATCTTCTATTAATATCTAGCTTGGTTTATT TTACATATGATTATAGACATTTAGGCAGTGTTTGGTATAAGTGCAACAACGAAATGGAACAAAATGCAAATG
• Tissue: flowers
• Gene name: LI_gene_65456;
• Additional information: details;

Expression of Ll_transcript_172486

FPKM

• FPAB: 43.2
• FPNAB: 85.2
• LF1: 46.5
• LF2: 42
• LF3: 42.6
• LF4: 55.8
• UF1: 46.8
• UF2: 42.1
• UF3: 44.6
• UF4: 46

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_172486

• Blastp: Serine--tRNA ligase from Helianthus with 81.15% of identity
• Blastx: Serine--tRNA ligase from Helianthus with 81.15% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419668.1)
• Pfam: Seryl-tRNA synthetase N-terminal domain (PF02403.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;