| Id Trinity | FTRINITY_DN57059_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_173081 |
| Sequence | AAAAAAACCACCTAGCTTAAAGATAACAGGATGCTCTAATGAGAATATCATTTTTTTATTTGGTTAACATTAATAGTTTATGAACAATTATTGTTCTTCC TCTCCTCCACTCTCTCCACTCCCAAAGCGATTTCCGGTAACTGAAACCAATTGATCCTCAACCAAACCCTAACCGCTTTTCTCTCTTCTCAGATTGAAGC CTCAACCAAACGAAACGATGTCGTCAGGACAAGTGATTAAGCGTGCTAAATACAAAACTACTGTCAAAGATCCTGGTACACCCGGTGTCATCAAATTGAC TGGGGAAAAATTTGTTTTCCGCCCTAATGATCCCACATCACACAACAAGCTCGAAGTGGATTTCAGACTTATAAAGAGTCATAAAAACACTAAAGAGGGA TCAAACAAACCACCATGGCTTAACCTTACCCATTCACAGGGAAGTTACATTTTTGAGTTGGAAAGCTTTTCCGATCTTCATGTTTGCCGGGATTTGGTGG GTGTTGCCCTTAGCAAGCATGGAGAAGCTGCAAAAGTTATTTCTGAGGAACAACTCAGCCCTGCTGAAATGGCACTCAGGATTAAGCTACTTCAAGAAGA TAGCAAATTGCAGAAGCTTCATAAGGAACTTGTGGCTAGTGGTAAGCTGACTGAATCAGAATTTTGGGCTACAAAGAAGAAATTGCTGGATCGAGATGAA AGCAGAAAGTTAAAACAACGGATTGGTTATAAAAATTCTTTGATCTTTGATACTAAGCCTACAAGTGATGGTCGGATAAACCAGGTTAAATTTCAGTTGA CACCAGAGATAAAATATCAGATTTTTGCCCTGAAACCAGCTGTTCACCAGGCATTCCTCAAATTTGTACCTAGTAAGATGAGCGAGGTAGATTTCTGGAA CAAATATTTTAAAGCTGAATATCTCCACAGTACCAAAAATGCTGTTGCAGCAGCTGCTGAGGCTGCTGAAGATGAAGATCTTGCTGTTTTTTTGAAAGAT GATGAGATATTGGAAGTTGAATCTCGAAAGAAGGTTCGACGGGTTGATCCAACTTTAGATATGGAAGCAGATGAAGGAGACGATTACACTCATCTTCCTG ATCATGGGCTCTTTCGTGACGGTAGCAAGGAAATATCTGGAGCTCAAAATACTCTGTATCAGAGAACATTGTTGCAAGATCTTAACAGACAAGGCGCAGT TGTTCTTGAAGGAAAAACTTTAGATATGGAGATGGAGCCGCCAAGAACAGTTGCAGAAGCCCTTGCTCGACGAAAACAAGGCGAATCTGACGGGGCTGTA GAGGAGGAGAGACGTATCAGAATTTCTAAAATGACCCAGATTGAGGATCTTCAGGCACAGAATGATCATCATTTTGCACCACTGTGTATCAAGGATCCCC GTGAGTATTTTGATTCCCAACAAGCTAATGCAGTAAAAACTTTGAATGATTCCCAAGGTGGATCCGTGAAAATAAGATGCAGTTTGAGTTCTGAGGAAGC CTATGGCTGTTTGAGGGCATCCATATCTAATATCAAAGCTATAGGATTAAGAGATCCTCTATTTAGTCATGAGGTTGCCGTTAAGGTCCTTAATGGGTTG ACTAAAAATATTTCAAGCACCAAATATCATCTTGGGAAAAATTCTCAGGACAGTGTACTTGATATATTGCCCAATGCAACTAAGGAGAAGCTACTAGATC ATTGGGTGAGCAGTCAGGAATTGCTGAGGCATTTTTGGTCTTCATATCCAATTACGACACAAAACCTTGCTAGTAAGGTCAAGTTAAGCTTTTATGACTT CAGTAAGATCTTTCGCTGAATTCTGTACATGGCTGTTAGAATAATTTATGAAGTCCCACATCGAATGAGTAATGAACCCTTTATAATGACTTGTGCAGCC CTTCCCCTATGAGCTAGCTATTGGGTGGAGATACGCCTAATTATTCTAATAATGACCTATCTAATACTGCACCAATAAAATTTCATAATTCTAGGATGAG TGTTTGCTTGTGATTATTTTTCCAGTTCATCTATATCATTAGCTTTTTTTCATGGGTGTTATCTTCATCGCTCATCCCCCGTACTCTCTCTTTACATCTC ATATAATGGCGGTGCATTGACATCATGAAATTATGGTTTCACAATAGGTTAACTCTCTTGCATCATGAGAATTGAGAAGTTCTTTGACATGTCAAAATCC TAATCTGGCTTGTAACTATTTGCTTGGGTGATCAGTCAATAGTAAACCAGTTTTGTCAAAATTTTGCTTGATCATATAAACTATTGCGCTGGCTTTAATC CAGATTGGTCAGTTTGATACATTGAATCACCTTTTTAAGCCAATTAATTGTTAGTTAACCATTTGTCCTTGTAGAGATAGCTTTTGAACCAAGCATTCAC TAATTCTTTTTACAACCCCCCTAACATGAAACCCCATTGGTTTTAATATGCTATATAGTAGCTACTTAGCTACAATCTAGATCTTGTAAACTTCTTGAGG ATCAAACCTTAAATTATTTATCAAGGGGACTTTGATATCATGTCATGGAACCGTTCAACTAAGAAATCAAGCAGGATCCTGAAATTGATGTTAAATAATC CAAACTGTCATATAGGTACTATGTAAAATGAGTGCATGATGTTCAATGAAGCTGAAGTGTGTGGGACTGATAATTATCTACATGGTCCGATATTTCCGAA CCTTGCTTCTTTTTCCCTTTATCCAGCTTACCAATTGTGCTGATATGATTAACCAGCTAGGCATTCGTAAATTGAGAGGGGTTTTCCTGCTGGATGACAT ACACTATATTGCAGATGTAAAATTATATAATGATCCATCAAGGAACCTCTATGAATTGCATTTTATTTTGTCTAATGTCTTGTTCATTTGGAAATTAAAT GCAGACCAAAAGACTTAAGGACGCCATGTCACAAGTATATTCTAAACTTGAGGTATTTATGTAGCAGAAGCCTCTCCTACTCATATTCCCCACTTCACTG ATGTCTTTGCCTTTGTTCTATCATTGCATGGATGACTAAATTAATTTTATTTGTAGTAACTATTTAAGTGTTCATATTTTTATTTTTTTGATTCCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65465; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_173081
| Blastp | Probable RNA polymerase II transcription factor B subunit 1-1 from Arabidopsis with 55.18% of identity |
|---|---|
| Blastx | Probable RNA polymerase II transcription factor B subunit 1-1 from Arabidopsis with 55.18% of identity |
| Eggnog | Transcription factor(ENOG410XRI6) |
| Kegg | Link to kegg annotations (AT1G55750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441065.1) |
| Pfam | Short C-terminal domain (PF09851.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |