Id Trinity | FTRINITY_DN57062_c2_g1_i2 |
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Name Transcript | Ll_transcript_171348 |
Sequence | ATTCTATTGAACGTGTATAAATTTTATATAGATATTATTTACACTAAATTATGTAATATAACGACATTTTTTATTTATATGATATTGTTCTCTCTTTCCT CATTCCTCTTCCAAAACCTTCAGATCACTTGCGAGGATGGGGTGGGAAAACATTTTCAGAAGGCGTGTTAGAGTATTCACAATGGCCATAGTAATATACC TCGATTATAAGGCTGTACAACAGCGGGAGAAATGGACTAGCAAATCTGGACAAGCTGCATTGTGGGAGAAGGCTCATGAGCGTAATGCTAAGCGTGTTCT AAATTTGATATTAGAGATGGAAGGCTTGTGGGTGAAACTTGGACAATATATGTCAACACGTGCAGATGTGCTTCCCCCAGCTTATACACGTCTTTTGAAG CTTTTACAGGACTCCCTTCCTCCTCGCCCTCTGGAAGAGGTTTATGGAACAATACAGAAAGAATTGGGGAAGTCAATGGACGAGATATTTTCTGATTTTG TCAATGAACCTTTAGCAACAGCATCGATAGCGCAAGTCCATCGTGCAACTTTGCTCAATGGGCAGGAAGTGGTTGTTAAAGTTCAACATGATGGTATCAA GGCAGTCATACTAGAGGACTTAAAAAATGCTAAGTCAATTGTTGACTGGATAGCATGGGCCGAGCCGCAATATAACTTTAATCCTATGATTGATGAATGG TGCAAAGAAGCTCCTAAAGAACTTGACTTCAACCATGAAGCTGAAAACACTAGAACTGTGGCTAAAAATCTTGGCTGCAGAAACCAATCAGATAGAAATA TGAATGCCAATCGAGTGGATGTCTTGATCCCAGATGTAATTCAGTCTACAGAAAAAGTTCTTGTTTTAGAGTACATGGATGGCATTCGGTTGAATGATTT AGAATCACTAGAAGCTTTTGGAGTTGATAAACAAAAGATTGTTGAGGAGATTACTCGTGCTTATGCTCACCAAATATATGTTGATGGGTTTTTCAATGGT GATCCTCATCCAGGAAATTTTCTTGTGAGCAAGGAATTTCCTCATCGTCCCATTTTACTTGACTTTGGGCTTACAAAGAAAGTATCAAGCACCTTTAAGC AAGCACTTGCAAAGATGTTTTTGTCTTCTGTTGAGGTTGGTGCTGGCTTTTGTGCCTTTTCATGTTTATATAGGTACTAACCAAATTATAATATTATATA CATGGTTAACTTGGGTGTTATGATAATTGTTGTTATCTAGAGTCTAAGATCATAAAATTTGAAGGGTAGTTATTATGCTCTGGCTTGAGCAGCAAGCCCA TCCTAGCCTTTTTACGAAGATTTGGGTTTTAAATTGAGTCTCATTTCTCAGGCAAATGTTTTGATGAGGTTGTGTACTAAAAGGTAGTCGTCTCGTTTTA ATCATTTTGTTAAAGTATTGAAGTCACATATAAGACAAGAACCATTTATAATAATTTGGAAAATCGTCCTCCCATGATTACATTTTAAGTGGAGTTGGAC CCAGTTATTCTAACATGGTATTTGATTCAGAGCTTACCCCGAAGTTGGGTTACTTGCAGATGTTCCTTCTTGCAAAATTTCATGCTCAGAGGGGTCATTC CTGGGTGTGAGGGGTGTTAAAGTATTGAAGTCCCATACGGTTGATAATATAAGTCAAGAGTCATTTATAATGACTTGGATGATCCTTCTTTTATGAGCTA GCTTTTGGGGTGGAGTTAGGCCCATTTATTCCAACACATTAAGCGATAATATTTTCAGATGTATTTATTTGGCATTCACCTATTAGTTATACCTTAGGAT TAACTCTAACATGCTGTTGAGCCACTCTTTCACAATTTAGGCTGCGCTTTGATCTTGACGACCTTCTTTTCCATTCTTTTCTTGAGAAAGTGAGCAGGAC AAGGTGATTGATGTTAATCTGGATTTTTTCCTCCAAAAAGTGTGGTTCTAGGGGAAGATGCAAATGCCATTTTCCTACATCACTTGATAGATTAAGTTTT TAGTTGGGTGCTTTTGTTACACTAACACAGTCATGGTTAAAACTTAAAAGTTCAGTCTTATTCAGGAACAAACCGTCATTGTAAAATATTTTTATTATTA GTGCAAGTTTCCCTTATTGGTTTCTCCAAATGATCTTTGTAGTTGATGACCTAGTATGTAAGTTTTTTTGTTATAGGGGGATTTCGTGGCCCTTCTGTCT GCGTTAGCAGAAATGGGGCTCAAGTTGCGTGTAGACTTACCAGAGCAGACAATGGAGGTAGTAACTGTATTCTTTCGTGCTACAACACAAGCAAATGAAT CCTATAAAACAAGGAAGTCTTTGGCCGATCAACGAACCAAAAATATGAAGGCTATACAGGAGAAAATGAATCTCGACCAAAAAGAAATGAAACGTTTTAA TCCTGTTGATGCTTTTCCTGGTGATATTGTAATATTTGGAAGGGTTCTTAATCTTCTAAGAGGGCTTTCTGCTACCATGAATGTGCACATAGTATATATG GACATAATGAGGCCATTTGCAGAATCAGTTTTGAGGGGGTACATTGACAAAGGGCCATCAGTAAATGATAGATGGATTTTTGATTCACCAGTCCATTCTG ATGTAGAAGCCAAGCTTAGGCAACTTTTGATTGAGCTGGGAAATAATGATAAAGTACTTGGAATCCAGGTATGTGCCTACAAAGATGGAGAGGTCATTAT TGACACTGCTGCTGGAGTGCTTGGTAAATATGATCCTCGTCCGGTCAAGCCTGATAGCCTTTTCCCAGTGTTCTCTGTTACAAAGGGTATCACTTCAGGA ATGATGCATTGGTTGGTGGATAATGGAAAACTAAATCTTGCGGAGAATGTTGCAAATATTTGGCCGGGATTTGGGTCGAACGGGAAGGATTTCATAAAGG TTCATCATGTGCTCAACCATACATCTGGTTTGCACAATGCAATGACAGACATAACTCGAGAAAACCCTCTACTTATGTCTGATTGGGATGAATGTTTAAA TCACATTTGTAAGTCAGTACCTGAGACAGAACCAGGCAAGGAGCAGTTTTATCATTATTTGTCATTTGGCTGGTTGTGCGGTGGAATCATTGAGCATGCA TCTGGAAAGAAATTTCAGGAGATCCTTGAAGAAGCGATAGTCCGCCCTCTCCATATTGAAGGAGAGATGTATGTAGGGATTCCCCCAGGGGTGGAATCAC GCCTTGCAGCTCTAACTGTAGATACAGATGATTTAAGGAAGCTTGCGGGGCTCACCGGTCGTCCTGACCTTCCCTCCTCCTTTCAGCCACAGCAAATTGC TCAACTTGCAACCACACTGCCCCCTCTTTTCAATACATTGCATGCTCGCCGTGCCATCATACCAGCTGCTAATGGACATTTATCTGCCAGGGCACTTGCG CGCTACTATGCAGCCCTAGCCGATGGCGGCAAGATACCTCCACCTCATTCTTCTGCTTCAGAGCCGGTACTTGGAAGTCATCCCCACATCCCCAAACTAT TTTCTTCTCAAAAAGCCCCCAAAAATAGGAAATGTTTTGGACGGAAAGAGGTAATCTTGCCTTCAATAGATAATAACCCTACAGGTTATGAAAAAGTCTC TAGCGTCGAAGATTTCCAGGATAATAGTGAAGGCTCCAGTACCAGCAAAGATAGTAATCCTCGAACCCGTGCTGAGGGCAAGTTCTTTAAGAATCCTAAG GTTATCGACGAATTCTTGGGTGTCGGAGAGTATGAGAATTTAACATTGCCAAATGGGGGTTTCGGGCTAGGGTTTAAGAGGTTTAGTTCTAAGGATGGAT CATCCATTGCCTTTGGTCATTCTGGAATGGGTGGATCTACTGGGTTTTGTGATGTCACACACAAGTTTTCTATTGCTATAACACTGAACAAGATGTCCTT TGGAGGTGTTACTGGAAAAATTGTTCAACTTGTTTGTTCAGAGTTGAATATTCCTGTGCCAGATGATTTCCTAAGATTTGCAAATGAGCAGAGTGGATCT GATGAGCAATTAAATATGGCTAGGCCTCTGATTAATTAAGAAATGATCACTCCTTTTATAATTATAGATACAATAATTTATTATATTGGTTTGGTGTTGA TTGGTGAGCCTCAACGTAATGATAATGTTGTTGCTTAGTAACCAAGAGGTAATGAGTTTAAATTCCGAAAATAGTATAGGGTAAGATTATGTTCATTCAC GTTCCACTAGGTAGGAGTCTTGTACATTGAACCACTGGTTTTGTTGTGGATCTCTTTTATCTCAAATCTTAGCATTACATGAATTTGCTTCCTTCTGTAT AATGTATTCAATTATGTACACAAAGTTGAACTTTAACCATTGAAATCTTGGTCCTTATCTAATTTCAGGTTCCACCATTTTATTTTCATCAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_65483; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_171348
Blastp | Beta-lactamase domain-containing protein 2 from Caenorhabditis with 26.69% of identity |
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Blastx | Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic from Arabidopsis with 33.23% of identity |
Eggnog | Beta-lactamase(COG1680) |
Kegg | Link to kegg annotations (CELE_ZK945.1) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458336.1) |
Pfam | Beta-lactamase (PF00144.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |