Ll_transcript_170728

• Id Trinity: FTRINITY_DN57068_c0_g1_i1
• Name Transcript: Ll_transcript_170728
• Sequence: TTATATTGAAAGCATCATATTCTCAAATTCTTATTCACAGTTCAAGGTCTTATACTAACCCAACAACTTTTCTAAAGGTTGTTCAAAGACTAGACTAGTC CTTAGTCTTTACAAGTTCCATCTCAGGAAAATTCTCAGTCTTTGCTTTGCTTTGCTTATTTTACAAGCTAGCTAACTCATTTCAACGTTATATGCTACTT CTTATGTTGTGAAATTGTATATGCACATGAAAGTTCCAATGGAGGAAAACCCATTCCCTGCATGGTCATGGTCTGTTGAGCAATGCTTGAAAGAATATGG AGTGAAAGTAGATAAGGGTCTGAGTACTTACGAGGTTGAGAAGCGTCGCCACGAGAAATATGGTTGGAATGAGCTAGCAAAAGAGAAGGGGAAGCCCTTG TGGCAACTAGTACTTGAACAATTTGATGACATGTTGGTAAAGATACTTTTGCTTGCAGCCTTCATATCATTTGTTTTAGCTTACTTTGATGGAAGTGAAT CTGGATTTGAAGCTTATGTGGAGCCACTTGTGATCCTTTTAATTTTGGTCCTTAATGCAATTGTTGGAGTTTGGCAAGAGAATAATGCTGAAAATGCTCT TGAAGCTCTTAAAGAGTTGCAATGTGAATATGCGAAAGTGTTACGGGATGGAAATTTAGTGCCTGATTTGCCTGCAAGAGAGCTTGTTCCTGGTGATGTT GTGGAATTGCATGTTGGAGATAAAGTCCCTGCTGATATGAGAGTTGCAACTTTGAAAACCTCGACTTTACGAGTTGAGCAAAGTTCCTTAACTGGAGAAG CTATGCCTGTTCTCAAAGGCACCAATCCTGTATTCCTGGATGACTGTGAATTGCAAGCCAAAGAGAGTATGGTTTTTTCAGGCACCACAGTTGTCAATGG GAGCTGTGTTTGTATTGTCATTACCACCGGAATGAACACTGAAATCGGAAAGATACAGAAGCAGATACATGAGGCTTCTCTGGAGGACAGTGACACTCCT TTGAAGAAGAAATTGGATGAATTTGGTGGCAGGCTTACCACTGCAATTGGGGTAGTTTGCTTTATTGTGTGGGTTATAAACTACAAAAATTTCCTTTCAT GGGATATTGTGGATGGATGGCCCTCAAATATCAAATTTTCTTTCGGAAAGTGCACCTATTATTTCAAAATTGCTGTTGCACTTGCTGTGGCTGCAATACC TGAAGGTCTTCCTGCTGTTATCACAACTTGTTTAGCCCTTGGAACAAGGAAAATGGCTCAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTAGAGACT TTGGGATGTACAACTGTGATTTGTTCTGATAAAACTGGCACTCTAACAACAAATCAAATGTCTGTGACTGAGTTCTTTACTTTGGGTGGGAAAACCAATT CTTCTCGAGTCATTAGCATTGAAGGCACAACTTATAATCCAAATGATGGGGGCATTGTTGATTGGACTTGCTATAACATGGATGTAAACTTAGTGGCCAT GGCTGAAATATGTGCTGTTTGTAATGATGCTGGGATTTATTTTGATGGTCGCCTTTTTCGAGCTACGGGTTTGCCTACGGAAGCCGCACTCAAAGTTTTG GTTGAAAAGATGGGAATTCCAGATATGAAGTCAAGGAACAAAATTTGTGATACACAACTTGCTGCTAACAACATGAAGGGCTGCAACACTCTGAAGTTAG GCTGTTGTGAGTGGTGGAATAAAAGATCCAAGAAGGTAGCTACATTGGAGTTTGATCGCATTCGGAAGTCAATGAGTGTTATTGTTCGTGAACCAGACGG GCAGAATCGGCTTCTTGTCAAGGTGTTCTGATCTGATGCCTTATCTTCAGATTGACTTTTATCAGAAAAGAAATGATCAGTCAGTTGTTACAATTGAATT ATATAGAGCAATTTGGCTATGTAAAATTATTCTTATTGAACCTTAGATTGACCATTAAGTATTTGGAAAAATTATATAATGTTGCATAACTAAGATATAT ATGCATAGTCCCGTTTAGGATTCACCATGATTGATCCTTTGCAACCACGTACAAATGGCAGGGTTGACATGTTACCAAGCTGAGTACAAAGCTGCACCTT TTATCGATCACTTGTTTCGCTGCATGCTGTTATTTTCGTTCAGTTCCTGAACTTACACTTTTCAGTAATACAACGGCTCCTCGTCATGTCTAACTGATTC TTAATTTGAGGTGTATGTTTCAATATGAACTTTGACCTCTTTCTATGCCTGGTTTCATCAGGTGCATCTTTCTAATTTCTGAAGCATCTGATTCACAGGG CGCTGTTGAGAGTTTACTAGAGCGTAGTTCATATGTTCAACTTGCCGATGGATCCCTGTTTCCAATAGATGAGCAATGCAGGGAACTACTTCTTCAAAGA CTCCTGGAGATGAGTTCGAAAGGATTGCGTTGCTTGGGTATGGCATATAAGGATAACTTGGGAGAATTTTCAGATTATTATGCAGATACTCATCCTGCCC ATAAGAAGTTGCTTGATCCAGCATGCTACTCATTAATTGAAAGTGATCTAGTTTTTGTTGGTGTTGTTGGTATAAGAGACCCTCCGCGTCCGGAAGTTCA CAAAGCAATTGAGGATTGCAAGAAAGCTGGTATTAGAGTTATGGTAATCACCGGAGATAATAAGTCAACAGCAGAGGTTATTTGCCGTGAGATCAAACTG TTCTCTAAAGATGAGGATCTCACATTGAAAAGTCTGACAGGTAAGGAATTCACATCTCTTTCTCATTCAGAAAAAGTTCAAATATTGTCAAGACCTGGAG GCAAGGTTTTCTCTCGAGCTGAGCCGAGACACAAGCAAGACATTGTGAGGCTACTGAAAGATCTCGGGGATATTGTTGCAATGACTGGAGATGGTGTGAA TGATGCACCTGCACTTAAGCTTGCTGACATAGGGATTGCTATGGGCATAACTGGAACAGAGGTTGCAAAAGAAGCTTCAGATATGGTGCTTGCAGATGAC AATTTTAGCACCATTGTTTCAGCTATTGCCGAGGGTCGCTCGATTTACAATAACATGAAAGCTTTTATCAGGTACATGATATCATCAAATGTTGGAGAAG TAATATCCATATTCTTAACTGCTGCTCTGGGGATCCCAGAATGCATGATACCAGTACAACTTCTTTGGGTGAATTTGGTTACTGATGGTCCACCCGCAAC AGCTCTTGGTTTTAACCCAGCTGATATTGATATCATGCAAAAACCATCTCGCAAAAGCGATGATGCTCTCATAAGTTCTTGGGTTCTTCTTCGTTATCTA ATCATTGGTTCCTATGTGGGAATTGCAACAGTTGGAATTTTTGTTTTATGGTACACCCAAGCATCTTTTCTAGGCATCAATCTTGCGAGTGATGGGCACA CAATTATAGAACTTTCGCAGCTTCGCAACTGGGGGGAATGTCATTCATGGTCTAATTTTACCGTTGCACCATACACGGTTGGTAAAGGTCGCATGATCAC ATTTTCAAATCCTTGTGACTATTTTTCAGTTGGCAAAGTAAAGGCCGTGACTCTGTCTCTCACTGTATTGGTAGCAATTGAAATGTTTAATTCTTTGAAT GCACTCTCGGAAGATAATAGCTTGAGAACCTTACCACCTTGGAGGAACCCTTGGCTTTTGTTAGCAATGTCAATATCACTGGGACTACACTGTGTCATAC TCTACATTCCACTCCTCAGTGATGTGTTTGGTGTTGTTCCACTTAGTTTGAATGAGTGGTTTATGGTTATACTTATATCAGTACCTGTTGTTTTCATTGA TGAGATTCTAAAATTTGTGGTAAGGAGTCAAAGGAAAATGAGAAAGGAGAAAGCAGCATGATGAGGTCTCAGATCAATGGCCACTATATAAAGAGGTAGA AGGGATGGTGATAAGAAGATTAATGAGAATCAAGCTAATTTTTTTGATACATTTATTATTTGGCCTATAGGAAAATTATAGTTCATAAACTTATGGAAAG AAATTTGTCACTTTTAATGATCATTATAGAAAGTATTTTAGACATCTTGTTCAAATGTTTTTTGCTTTGAAAATAATGTTCTATGAAAGAAAAAAGAAAA CAATTATAGCATGGTATAACACCTGCAATACTGATATATTTTCCATTGGAAGGGATGTTTAGACCATAGTCACTCTCAAATACTACTATTTCAGTAGTAT ACTCGGCAGGGTTTCTATAACTCCTCACAAAACTGTTTCTAGTTACATTTCAATTAAATTTTGCTTCACTGTAATAGAAATAAAGGATAACATTCTTT
• Tissue: flowers
• Gene name: LI_gene_65524;
• Additional information: details;

Expression of Ll_transcript_170728

FPKM

• FPAB: 0.4
• FPNAB: 0.4
• LF1: 0
• LF2: 0
• LF3: 0.1
• LF4: 0
• UF1: 0
• UF2: 0
• UF3: 0
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_170728

• Blastp: Calcium-transporting ATPase, endoplasmic reticulum-type from Lycopersicon with 78.91% of identity
• Blastx: Calcium-transporting ATPase, endoplasmic reticulum-type from Lycopersicon with 77.69% of identity
• Eggnog: P-type atpase(COG0474)
• Kegg: Link to kegg annotations (543554)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422322.1)
• Pfam: Cation transporter/ATPase, N-terminus (PF00690.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;