| Id Trinity | FTRINITY_DN57068_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_170741 |
| Sequence | TTATATTGAAAGCATCATATTCTCAAATTCTTATTCACAGTTCAAGGTCTTATACTAACCCAACAACTTTTCTAAAGGTTGTTCAAAGACTAGACTAGTC CTTAGTCTTTACAAGTTCCATCTCAGGAAAATTCTCAGTCTTTGCTTTGCTTTGCTTATTTTACAAGCTAGCTAACTCATTTCAACGTTATATGCTACTT CTTATGTTGTGAAATTGTATATGCACATGAAAGTTCCAATGGAGGAAAACCCATTCCCTGCATGGTCATGGTCTGTTGAGCAATGCTTGAAAGAATATGG AGTGAAAGTAGATAAGGGTCTGAGTACTTACGAGGTTGAGAAGCGTCGCCACGAGAAATATGGTTGGAATGAGCTAGCAAAAGAGAAGGGGAAGCCCTTG TGGCAACTAGTACTTGAACAATTTGATGACATGTTGGTAAAGATACTTTTGCTTGCAGCCTTCATATCATTTGTTTTAGCTTACTTTGATGGAAGTGAAT CTGGATTTGAAGCTTATGTGGAGCCACTTGTGATCCTTTTAATTTTGGTCCTTAATGCAATTGTTGGAGTTTGGCAAGAGAATAATGCTGAAAATGCTCT TGAAGCTCTTAAAGAGTTGCAATGTGAATATGCGAAAGTGTTACGGGATGGAAATTTAGTGCCTGATTTGCCTGCAAGAGAGCTTGTTCCTGGTGATGTT GTGGAATTGCATGTTGGAGATAAAGTCCCTGCTGATATGAGAGTTGCAACTTTGAAAACCTCGACTTTACGAGTTGAGCAAAGTTCCTTAACTGGAGAAG CTATGCCTGTTCTCAAAGGCACCAATCCTGTATTCCTGGATGACTGTGAATTGCAAGCCAAAGAGAGTATGGTTTTTTCAGGCACCACAGTTGTCAATGG GAGCTGTGTTTGTATTGTCATTACCACCGGAATGAACACTGAAATCGGAAAGATACAGAAGCAGATACATGAGGCTTCTCTGGAGGACAGTGACACTCCT TTGAAGAAGAAATTGGATGAATTTGGTGGCAGGCTTACCACTGCAATTGGGGTAGTTTGCTTTATTGTGTGGGTTATAAACTACAAAAATTTCCTTTCAT GGGATATTGTGGATGGATGGCCCTCAAATATCAAATTTTCTTTCGGAAAGTGCACCTATTATTTCAAAATTGCTGTTGCACTTGCTGTGGCTGCAATACC TGAAGGTCTTCCTGCTGTTATCACAACTTGTTTAGCCCTTGGAACAAGGAAAATGGCTCAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTAGAGACT TTGGGATGTACAACTGTGATTTGTTCTGATAAAACTGGCACTCTAACAACAAATCAAATGTCTGTGACTGAGTTCTTTACTTTGGGTGGGAAAACCAATT CTTCTCGAGTCATTAGCATTGAAGGCACAACTTATAATCCAAATGATGGGGGCATTGTTGATTGGACTTGCTATAACATGGATGTAAACTTAGTGGCCAT GGCTGAAATATGTGCTGTTTGTAATGATGCTGGGATTTATTTTGATGGTCGCCTTTTTCGAGCTACGGGTTTGCCTACGGAAGCCGCACTCAAAGTTTTG GTTGAAAAGATGGGAATTCCAGATATGAAGTCAAGGAACAAAATTTGTGATACACAACTTGCTGCTAACAACATGAAGGGCTGCAACACTCTGAAGTTAG GCTGTTGTGAGTGGTGGAATAAAAGATCCAAGAAGGTAGCTACATTGGAGTTTGATCGCATTCGGAAGTCAATGAGTGTTATTGTTCGTGAACCAGACGG GCAGAATCGGCTTCTTGTCAAGGTGCATCTTTCTAATTTCTGAAGCATCTGATTCACAGGGCGCTGTTGAGAGTTTACTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65524; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_170741
| Blastp | Calcium-transporting ATPase, endoplasmic reticulum-type from Lycopersicon with 78.91% of identity |
|---|---|
| Blastx | Calcium-transporting ATPase, endoplasmic reticulum-type from Lycopersicon with 78.91% of identity |
| Eggnog | P-type atpase(COG0474) |
| Kegg | Link to kegg annotations (543554) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422322.1) |
| Pfam | Cation transporter/ATPase, N-terminus (PF00690.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |