| Id Trinity | FTRINITY_DN57080_c3_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_171389 |
| Sequence | AGAAGGTATATGGCTGAAAATGAACTCATCCTTCACTTTCCAACTTCAAATTACACAACTTACGAAGTTAAATGATCAACTCCCTAACTCTTCCTTCTTT CGCCACCACCACTTCACCACTTCTTCCGCCGTTACATCACGCCGTTAACCACCACCTTTTCCGCCGCAACCTATGCACCACAAAACGCTGCCGTATAATA ACCGTATTTTCCAATCACTCTCACCACACCGATGGCATAACCGTAAATTCCCGAGCCCCTCCAACCACCCGAAGAACCGTTTTAGTGGCACCGTTTCTCG CCGCCGCCGCGTCGTTTCTGCTCTCAGCAAGAGCGGAAGAGAAAACTTCGCCGCCGCCGCCGCCGACGGCGGCGGCGGAGTTGCCGGTTTCGATACAAGA GGAGGTGATAACGTCGAGAATTTACGACGCGACGGTTATAGGAGAACCGTTGGCGATAGGGAAGGAGAGAGGGAGAGTGTGGGAGAAGTTGATGAATGCG AGAGTTGTGTATTTAGGTGAAGCGGAACAGGTTCCGGTTCGTGATGATAAGGAATTGGAGCTTGAAATTGTGAAGAAGTTGCATAAGATGTGTTTGGAGA ATCATAAGCTTTTGTCTTTGGCACTTGAAACTTTTCCTTCTAATCTTCAACCACAGCTTAATCAGTATTTGGATAACAAGATAGATGGAGAAACTTTGAA GTCATATACGTTGCATTGGCCACCTGAACGGTGGCAGGAGTATGAACCTATTCTTAATTACTGTCGTGAAAATGGAATTCGTCTTGTTGCTTGTGGCACC CCACTAGCGGCTAAATTAGGAGGGAGTGACAAATACCAGACTCTCAATGCTACATGCAAATTAACTTACAATATGCACAAATTTTAATAACAATGAAGAG TAGCGCCCAAGGATTTTAATTCCATTGTGACAAAAGAAACCTAATGTAAATAGTTCAAGTCCTAAATGAAATAGGAAAGCATGTCCCTATAATTGACTTG TAAATGAATTCATAATCCCTGAAGTTCCCAAATCAAACAGTAGGTTTAATTCATTTAATTTAAATTGGGGAGAAGATTATCAAATTGATTAATTGATATG TCCAGTTCTTATACCCCAAATTGAAGATACATAATGATGATTGTTAAGAATTGGTTGTTTTCTCATCAACAGATCTTAAGGACTGTCCAAGCAGAAGGTA TTAGTGGGCTTTCAAAGGCTGAACGTAAAGTATATGCACCTCCAGCTGGTTCAGGCTTCATATCAGGCTTCACTTCTATTTCACGTAGATCATCAGTTGA TGGTACTCTAAATATGTCTGTTCCTTTTGGTCCAAGGTCATATCTATCTGCACAGGCTAGGGTAGTCGAGGAGTATACTATGTCTCAGATCATCTTACGA AACGTGCTTGAAGGAGGAGCCACTGGTATGTTAATAGTTGTGACTGGTGCAAGTCATGTTACATACGGATCTAAAGGAACTGGTGTGCCAGCAAGAATTT CAAGAAAAATTCAGAAGAAAAACCAAGTAGTTATATTACTTGACCCTGAAAGGCAATTCATTCGTAGAGAGGGAGAAGTTCCTCTTGCCGATTTTTTATG GTATTCTGCTGCTAGACCCTGTAGTAGAAATTGCTTTGATCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCGGAGTAGAGATGCCCTTCCACAG GATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTTTTACAGAACTTCTTTGATCTAGAGCAGTATCCTCTGATTGCAGAACTCACTCACC GGTTCCAGGGTTTCAGGGAAAGATTGTTGGCTGATCCCAAATTCTTGAACAGATTAGCCATAGAAGAAGCAATATCAATAACAACTACACTAATAGCACA ATATGAAAAGCGGAAAGAAAACTTTTTCCAAGAGCTTGACTATGTTATTACAGACACTGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCT GCACCAACCTTGTCGTTCCTTTCATATGCTGATGAGACGAATGCACCTTCTTTAATAGACTTTCTTGGCTCCATCCCAGACAATGCATTTCAAAAGAATC CAGTAGGGACAAACTGGAATCTCAATCATAGAGTTGCGTCAGTTGTATTTGGTGGTTTAAAACTAGCTGGTGTTGGATTTATTTCGAGCATAGGAGCTGT TGCTTCTTCAAATTCTCTTTATACAATTCGTAAATTCTTTAATCCAGATGTGATCACTAATCAACGAGTTCTAAGGTCACCAGTATTCAAAACAGCAATT GTTTATGCACTCTTTCTTGGAGTGTCTGCCAATCTACGCTATCAGATAATTGCCGGGTTAGTGGAGCAAAGGATTTCAGATCAGTTTGCATCCCAAACAT TTCTCGTAAATATGCTATCATTCGTAACACGGACAATCAATTCCTACTGGGGAACCCAGCAATGGATTGACCTTGCCCGCTCTACTGGACTGCAAGTTAG AAAGATAGAGTCACCTACATCAGAAGACTCTCCTATCAATGCTGCAGTTGTATGCAACAAAACAGAAGATGCCATCATTGATGAGATAAAAAATGATTGA GGTGAAAATTTCTCGGTAATATGTATACATTGATAATGTAAGTGTTTTTATACTGTCAGTTAATCATCTATCATTCATATGTTAATCACCATGGAATATC AAACAAAAGTAATACAAATAAACGGTGAATGATATGATGAAAGTGTAAAAAACTTTACACTTGTTTTCACCATTATCAACACCCTTCCCTCTATGATTAG CGTGCTTACAATTTCATCCAACGCTAAGTTGTATATTTTTTATATGACCCCAGGTTGGGAATGTAATAGGAATTTTTGTGTAAGAGGAATAAGTATATAA ATTTATAAATACTTTTTGGTTAAAGTGATCTCTTGGTTACCCTTTTTCTAAAAGGACGGGGATCACCTGTCCCAAATCATGTCCCCAACCATGTACCAAG CCAATCAGAATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65624; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_171389
| Blastp | Protein RETICULATA-RELATED 5, chloroplastic from Arabidopsis with 71.58% of identity |
|---|---|
| Blastx | Protein RETICULATA-RELATED 5, chloroplastic from Arabidopsis with 71.58% of identity |
| Eggnog | Domain of unknown function (DUF3411)(ENOG410YH33) |
| Kegg | Link to kegg annotations (AT2G40400) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416858.1) |
| Pfam | Haem-binding uptake, Tiki superfamily, ChaN (PF04187.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |