Id Trinity | FTRINITY_DN57086_c1_g2_i1 |
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Name Transcript | Ll_transcript_170822 |
Sequence | TATAGAACAACCTTGCATGTCTTAACTCTGTCCTGAACAAGAATTTTGCAATTTCTTCAATAGGATTGTTACAGTGTCAAATGGCCAAAAACTTCTCTTT CATTTTCTTCAATGAAAGTTTTCTTGTTCTTTTGATTCTATTGGCTTCTGAGAAGAGGATTAAAGAGGGAACTTTTACAAATGTTGTTTAAAAGCTAGCA ACAGTTCAAATTCAAACCAGTCTAATAAAAAGGTGTTGAGAGAATTGAGGGTTATTGACAAAGTTTTTTATGTTAAGATGGATGATTCATCCAACTTTGA TGAAAACTCTGATATGGGGTATCAACCTTCACGTTCTTCAATTGACCAAAATGATCATTCACTCACTGAAACTGCTAGCTACTCTCCAATCAGTGGCGAT TCCTTTGCGTATTGCCGGACTAATTCAGAGTCAGAGGTCTCAAACTTCTCAGAGCCTGTAGATGACAATAGCTATGCTAGCAGTGAACCATCGTCTTCTC GTTCGAGGTCTGCGAAACATAGTCAAGCTTCTCTTTCCAGGTTGGGAATGAAGCAGAGGAGAGATTCATCTGATGATAATCCTAACGTCCTTGATCTGTT GGAGTCAGAGATTGAAATGATGAAAGAAAGATTTTCAAAGCTACTGCTAGGAGAAGACATGTCTGGTGGTGGAAAAGGTGTATGCACTGCAGTTACAGTC TCAAATTCAATTACCAACCTCTATGCCACTGTATTTGGACAAAATTTAAAGTTGGAGCCACTGAAGCCTGAAAAGAAGACTATGTGGAAAAGAGAAATGA ATTGTCTAATATCTGTGTGTGAATACATAGTAGAATTTGCCCCAACTGCACAATACTTGGATGATGGCACAATTATGGAGGTAATGACAAGCAGACCAAG ATCAGATATTTATATCAACCTCCCAGCTTTGCAGAAACTTGACACTATGCTCATAGAAATATTGGATAGTTTCACTGATACCGAGTTTTGGTATGCGGAG CAAGGGAGCATATCAGGGAATTTAACCCGTTCGCGCGAAGGCTCGTTTCGAAAGATTGTTCAGAGGAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTG TTCACCCTGGTGGTGTCTCTGTTAAGTCAAGGAAGCACTTGATTGAGAAAAGGGACTGTGCTAATCAAATTCATAAAGCATCCATGGCGATAAATAGCAG TGTTCTCGCTGAGATGGATATCCCGGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_65684; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_170822
Blastp | Rop guanine nucleotide exchange factor 2 from Arabidopsis with 59.75% of identity |
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Blastx | Rop guanine nucleotide exchange factor 2 from Arabidopsis with 59.75% of identity |
Eggnog | rop guanine nucleotide exchange factor(ENOG410Y9NY) |
Kegg | Link to kegg annotations (AT1G01700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459803.1) |
Pfam | PRONE (Plant-specific Rop nucleotide exchanger) (PF03759.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |