Id Trinity | FTRINITY_DN57088_c4_g1_i9 |
---|---|
Name Transcript | Ll_transcript_172785 |
Sequence | GTAGTTTTAACGTCTTATCCATATTCAGATGCACAGTATGGTGGACTCTTGACTAATTTTGGGCAACAAGCTATGAAAAAAGGGTTGTTATGAAACAATA ATCATGTGTGTGCAAAAATATGGCTTATCACTTATTTCATTTTGAAGAAGTTGAGCATTTCAGCAACGATAACAGTGAGCATGGAAATGGTTTGGGCTAT AAACCCTCAATTGTATGGAATGCATCATACTAGAATGCCTTTGCCACTTGAAATGGAGGAGGAGCCTGTTTATGTTAATGCAAAGCAGTATCATGGTATT TTGAGGCGAAGGCAGTCACGTGCTAAGGCTGAGGTCGAAAAGAAAGTGATTAAAGCTAGAAAGGTATGGTTGATATCTAAATTAGTAGGAAGGGGCCACT GCTATGATTTTTTTTACAATGAAACAGAAATGAAGGAAAATAGCGGTAAAAACAAATTTTGTTTAAAGCAACAGGTTACTTTTTGCTGGATTAGTAGAAA TTGTGCATTCATATTCCTTCCTTCCTTGTATTGGGAGGAAAAACTTACCCTGATTTGGTTCAATATATTCCAAGTTATGGCTTGCATTATGCTTCATATT TCATTTCTTTTGCCTTTCATTCTTGTGTTGGCAAGCTACTTGATCTTTCTCAGTATGATGTATAGATATAGGCAATGGAAGATTATTTATCATGTTTTAT TTGCTGGACTGCCGATTTTAGTTTCGTTCTCATGATTTCTTTGGCTATTTTGCTTCCGATTAGGTCTACTTCTTGTGGCTATGTGATAGAAAAGACAATA CTGAAAAATGACAAAATTGAGAACTCAGTATTGTCTGTGCTAAGATTCCCTTCGGTGGAAATGATTATTAAAGAAAGGAAAAAGCATAGAAAACAGGAGG ATATAAAAATACTTGGAAACAAAATTTCAATATAAACTCATTTTGAATGTAACAAGGCATCAAATCTCGTGCTAGGCATAAAAAACAGGAGGAGATAAAA ATATTTGGAAATGATTATTGTTTGTTTGAGGATGAAAGCAGTGCTTTTGCTTTTACTTATTTTTTAGGGTGAGGAAATCTTCCATTCCGAGATTATTACT ATCATGAATCATTAGTTTTGCCTAGACGGTGTCCATGTCATAGGATATGGTTGCAATAGAGGGAAGAATCATGTAGCAATAGAAGATTTGGCAACACTGA CCACAGATCTTGGTTATGTATTTGAAAATGAGGGGTTATGCTATTCAATAATTAGCAACATAATAACACAACTGTCTATTCTTTGCAATATGTCTTACGC AAGACTTGTGTTTCTTTTGCATTGAAATTAATGTTAAAATTTGCTGTGGCCTGAAAAGGAACCCCAAGTTACTTTTGTGGGGCAAAAACACTTCGGGTGG AAGTTTTGATTTTTATTAGGCCTGGAGAGATGGTAGGAGTTGAGGATAAAGGTCAAGTGGGTTATTGATCAAAACACTTTCAAGTTTTACAATTAAGCGT AAAACATGAGGCACATAGTGGATGGTTAGGTGGAACATTTTTAGTGGAAGTTTAAATGAATACTGTGAGTAGGATACTCTAATCATTCTAGTCATCTGAA AACAAGTTGAGCTGACCGTTGAGCCTAGAATTTGTGGTTTCCGTAGACATGATTATATTCTAGGGAAATATCACCTATGAGGATGACCATGATGCTTTTT TTGGGGGCCTTCACCATGATTTGAATCTAACAGGGGTGAGGTGTTTTGTACTCATCATAATTTTATTTCTTTCATTTCTTGCTATTTTTGTTAAGAATAG ATCATATTGTTACTTGTTCCAACATTCATTTCTTGCAGCCGTATCTGCATGAATCCCGTCACCTACATGCGCTGAGAAGGGCAAGGGGTAATGGAGGTCG CTTTCTCAATACAAAGAAGCTTAAAGGTAACAGTTCTGATGGCACCATAAGCAACAACAATGGTGCACAACCCTTAACATTATCTGGCAGCTCATCTGCA GCTCAACATTTGGTTACCAACAACGGAATTCTCGTCTCATCAAATGATCAGTATGGTGCATCACAGTCCATAGTTGAGGACATGCATCAGGTGCAGAGTT TCACCATTGGTTACCATGATGGCAATGGTCTTTCATCACCATACTATTCACAGTTAAATGGAAAAAAAGATGGAGACTGCTTTGGTAGAGAGAGGGAAAG CGTGCGCATGCATGGAGCCCCAAACGGGGCTGTAAAGTAACATTCCCTCGGAGTTGGTGGTTTTCTCTCTGGCATATATGGCAACAGTTAGGTGAAGATG AAGGTCTCTGTCTAATCCAAAAGTTGGAGGAAACCACCCTTGTGTTACAGTAATTCTCAGGCAATTCATTCTTGGCTCAGTTACTTAGATCAAAGTGGTG AGATCAGCAAGGAAGATTCATGGTACAATCCACTCCTTGTTTGGTCTCCCCTTGTTTCCTATTCTCTTCATAAGTCCACTTGTTAAATGGATTAGAGAGA AAGCAAAAATAACATTGGTTTGTGAACTTTTTAAGTTGATATAATGGTGAAAGTTAATGTGTGAAACTGGATTTGGAGGTTATTGAACTGTAAACAAATT TGTATGACACATACTGCACAATTGTGTAAACCTTCTTCCCTATTCTCTATTTGTCCTTAATTGTTGTGTGTAGGAGTTTTTCATGGATGTGTTTGTGCAA CCATATGAAATTTGCTAGCCTATTATTGTTGTAGCTCTTGCATGCCCATAATCTTGATATTGTTGCATCCTATAAATGTGGCAAGTGTTGAAGTGAATGA ATTTAAAGTTGGTGAATAAATCTGCC BLAST |
Tissue | flowers |
Gene name | LI_gene_65724; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_172785
Blastp | Nuclear transcription factor Y subunit A-9 from Arabidopsis with 73.08% of identity |
---|---|
Blastx | Nuclear transcription factor Y subunit A-5 from Arabidopsis with 75.68% of identity |
Eggnog | Nuclear transcription factor Y(COG5224) |
Kegg | Link to kegg annotations (AT3G20910) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449593.1) |
Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B (PF02045.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |