| Id Trinity | FTRINITY_DN57089_c2_g3_i8 |
|---|---|
| Name Transcript | Ll_transcript_172202 |
| Sequence | AAAAGAGTGAAAAAGAAAGAAGAAAAGAAACGAAAATGTGAGGTCACAGAAACAGCTTTATCTCCTTTTTCTGACTTCGCTTCCATCCCCTTTCATAGTA ATGATTCTGCACCTTACTCTTTTATCTCTTTTCTCACTAATCCAAACAAAAAACAAAACTTGAATACCCTCCCTCATCTAATCTACCTTCTTCATCTTTC TCTCTCTCTATCTCACGCGCATATAAAGTAATATAGTAGTTCAATTTTAATGCTTTTCCATCACCCTCTTTCACTGCCTATGTAAAATATTTGTATCTAT CAAATGTGTTGCAGAAAGTTGTGTTTCTCAGATCCCTATATTACTCACAGAAAACGATACAACACCTTTCACCCTCTCTCTCTCTCTCTTTCCCCTCATA TTTCTCTTTCAAATCATATATACATATATTTATATAGTGTGGTCCTTAACCTCAGTATCACGCGCATATTATTCTGAATTCCCTGCTTTTGCTTTTATCG ATCGCTTGTGATATTGAGTTGAGGAAGGAAATAATGCAAGAACCAAACTTGGGAATGATGGGTGGTGGTTTGGGTGGAGACGGCGGCGGCGACACCCAAA ACCGACAACTGAAGGCGGAGATAGTTACTCACCCTCTCTATGAGCAGCTTCTAGCAGCACACGTGGCATGTCTCAGAGTTGCAACTCCAATAGATCAATT ACCACTCATTGATGCTCAGTTATCACAGTCTCACCATCTTCTTCGCTCTTATCTTTCTCAACAAACTCATTCTCTTTCACCTCACCATCGCCAAGACCTT GACAACTTCATGGTAATACTAATAATACTACCACTACTACTATACCATCTCATATTCGTAAACCAAAAATTGGTAATTTTTAAGGGTTTAATGATCTCTT ATGCTTCATTTGTGCTAACAAAATAGGATTTCACTGCATCCATATATGCTGTTATTGTTACCATTGCAGGCACAATATTTGATAGTGTTGTGTACTTTCA AAGAACAGCTTCAACAACATGTTAGAGTCCATGCCGTCGAGGCTGTCATGGCTTGCCGTGACATTGAAAATACCTTACAAGCTCTCACAGGAGTGGGTTT GGGAGAAGGAAGTGGCGCAACAATGTCAGATGATGAAGATGATATGCAAATGGATTTGTGTTTAGATCAGTCAAGCGCTGAAGGGCATGACATGATGGGA TTTGGACTTCCTACAGAATCTGAAAGATCACTTATGGAAAGAGTTCGCCAGGAACTCAAGATTGAACTCAAGCAGGGCTTTAAGTCAAGAATTGAAGATG TTAGAGAGGAAATATTAAGGAAACGAAGAGCTGGTAAATTACCAGGTGACACAACTTCAGTGTTGAAGAACTGGTGGCAGCAACATGCCAAGTGGCCATA CCCAACTGAAGATGACAAGGCAAAGCTTGTGGAAGAGACAGGTTTGCAGCTGAAGCAAATCAACAATTGGTTCATCAACCAAAGGAAACGAAACTGGCAT AGCAACTCTCACTCGGTCACCTCTTTGAAGTCCAAGCGCAAGAGGTAGACATATATATAAATGTATATATATGCATGGAAGTACCTTATGGGTTATTGCT CATTAAACTTGATAGTGTAGTGCACTAAGGATCCAAATCATAGAACATTTACTGATTTACTCTAATGTATGTAATGTAAGATATCTTAAAAATATTAGAT GGGTGTAAATTTGTGGAATTTAATGGATGCAAAGTTGCAAACTTTTCTGTTATTAACTGTGATTGCCTCCATTTTTTTTTGTTATCCCTCCATTTCTTTT AATTATACGTCCTTGTAAATGGTTTGCTAAATTTTATGACTGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65736; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_172202
| Blastp | Homeobox protein HD1 from Brassica with 84.69% of identity |
|---|---|
| Blastx | Homeobox protein HD1 from Brassica with 85.19% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (106394496) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422212.1) |
| Pfam | KNOX2 domain (PF03791.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |