Ll_transcript_171842

• Id Trinity: FTRINITY_DN57094_c0_g2_i2
• Name Transcript: Ll_transcript_171842
• Sequence: GTGAAATCAAGCTACCAAATTCACTGATGCGCATGGAGTCTAACTGAGACCATAACCAAAGCCAAGTTGGTCTGAATAACTGGTCATCACTGACACAGTC AGCTACCATTCTCTCTCACTTTCCCCTTTCTCTCTTTATAACTCCAACTCCATAAATGTGTTTCTAAAATTTGAATTGCTAACTTGAGCAATCCTAAACT ACCCAACTCACCCTTTCTGTGCCAAAGGAGAGTGGGTTCATATGGGTCAGGGTCTGAGTTGCAGAGGGAGCCATGAACATGGCCTTTTCCATGCTGTTCA GCATGGTGATTTTCAAACTTTTGCAACTCTTTTAGAGACACACCCTTCTCTTATGAACCATACCACTGTCTATGATCGCCACTCTCCTCTTCATATTGCT GCTGCCAATGGCCAGATCCAGATTTTAACTAGGCTTTTAAATGGATCTGTGAATCCAGACGTTTTGAATCGCCAAAAACAGACCCCACTTATGTTGGCAG CAATGCACGGAAAGATTGCATGTGTGGAAAAACTACTTGAAGCAGGTGCTAATGTATTAATGTTTGATTCAGTTTATGGAAGAACCTGCTTGCACTATGC TGCATACTATGGCCATTCTTCTTGCCTTAAGGCAATTCTTTCAACTGCTCAATCTAGTCCAGTAGCTGCTTCTTGGGGGTTTGCTCGGTTTGTGAATATT AGAGATGGTAGGGGAGCAACACCGTTGCACTTGGCAGCACGTCAAAGACGACCTGAATGTGTACATATCCTCTTAGACATTGGATCTCTTGTTTCTGCTC CTACCGGAAGATATGGCTGTCCTGGGAGTACAGCTCTTCATCTAGCAGCTAGAGGGGGATCTCTGGATTGCATCCGTGCACTGTTGGCTTGGGGTGCAGA TCGTTTTCAACGTGATACATCTGGGTAATGTAGTTTCTAAATACAAATTCCTACTATTCAAAGAAGCGATGAGGCTATTGACACTCCACTTTTTTCTACT TAACCTCATTTCTAAACATTCACAATTTTTGTTTCTTTATAATTGTGATTGGATAATGAGGAGGTAGATAGGTAAAATTGAGTGTTAGTAGCTCCACTGT AACATAATTATCTTTGACACATGAATGCAAACATATTGCATTAAAATCTTTGTAGCTTTTTGTTGTTGCCTTTGCTTACTATGAATTGTTATGACTAAAT GTTAGTCTTTTAGGAAAACTCTTGTATTCCTTTTTGATGTTATCCTTATGAAAAATTTCAATTTAGGAGGCAACATACCACATTTAATGATGTTGTCATC ATAGATTCATAACTTTTAACTAGGTATTCTTTCATCCGCTTCAACGCTCTGAATTTATGAAATTTCTTTTGAAATTGTCTGGTATGTTTATGCAGGAGAA TGCCATATATAGTTGCATTGAAACACAGACATGGTGCATGTGCAGCTTTGTTAAGTCCTACATCTGCAGAGCCTCTTGTCTGGCCATTATCTTTGAAAGT CATCAGCGAGCTTAATCCCGAAACAAAAGCTTTACTAGAGCACGCCCTGATGGATGCTAACAGGGAAAGGGAGAAGAACATATTGAAGGGTAGTGCTTAC TCTCTTCCATCTCCATTGCACTCTGATGTGGTAGATGACAATATCTCTGAGGTTAGTGAGACAGAATTATGCTGCATCTGCTTTGAGCAAATATGCACAA TTGAAGTCCAGGACTGTGGCCACCAGATGTGTGCACAATGCACACTAGCTCTCTGTTGCCACGGCAAGCCCAATCCTGCCACGGCTTGTCTTACTCCACC ACTTTGTCCATTCTGCCGGACCGCCATAGCTAAACTGGTGGTTATCAAGACAGAAGAAAACTATGATGACATTGATCAAGATGGTTTTGATATCAATTGC TCCAAGATAAGCAAGTCAAGGAAACCGCATAACTTAAATGAAGGTGATAGCAGCAGCTTCAAGGGACTAACCACGGTCGTTTCATTTGGAAAGATGGGCG GTCGAAGTTCTGGAAGGATTGCTGCTGAAAATGAGTGTATTGATAATAAACAACAGTGATGTCGATGCCCATGCTTTCTGCTTAATTGCTTATCAGTAAT TCCATATTAGCAAATTGATAAGGAGTTGCTTGACTTGCAAGGCAAAATGATAGTACAAAATGTTGGTGCATTGCATGTCATGTTTTGGTTGTAAATTGTA ATATTATTGTTACTTGAGAACTAAGAAGCATTCGCTTCAATGATTTTGGGCAATGGTATTGTGTATATGTAATTCAGTGAAATGAGAAATTATTTTTCTC TAAGGTGTAAGTCTCTAAGATCATAAGAAAATGTAATTTGTTGTTTTGCTTCTGATTTGTTTCTGTGTACCACAATTAGCAATAAAATATGAAAGGGCTT GGTATGAAA
• Tissue: flowers
• Gene name: LI_gene_65776;
• Additional information: details;

Expression of Ll_transcript_171842

FPKM

• FPAB: 2.4
• FPNAB: 4.3
• LF1: 5.6
• LF2: 2.8
• LF3: 2.6
• LF4: 2.8
• UF1: 5.4
• UF2: 3.1
• UF3: 2.7
• UF4: 3.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_171842

• Blastp: Putative E3 ubiquitin-protein ligase XBAT31 from Arabidopsis with 70.61% of identity
• Blastx: Putative E3 ubiquitin-protein ligase XBAT31 from Arabidopsis with 70.61% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT2G28840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448632.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;