Id Trinity | FTRINITY_DN57108_c0_g2_i3 |
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Name Transcript | Ll_transcript_99290 |
Sequence | CTTTCTAGAGGTGAATTGTTGATTCACTTTATTGCTTGTTTCAAGGAATTTTAATATGGGAATCTAACAAAACTATGTTCTTTTGCACTAGTTGATGTGA AGAAGTGGTGGTTATGGGTCTCCCCCATGATGTATGCACAAAATGCCTAGGTTGTAAATGAATTCCTTAGAAAGAGTTGGGCACATGTTACACCAAATTC ATAACAATCATTAGGACTACGGGTCTTGAAAGTGAGGGCATTTTTCCCTGAAGCATACTGGTATTGGATTGGAATTGGAACTTGTATTGGATACATGTTA CTATTCAACTTCCTTTTCGCCTTGGCCTTACAGTATCTTAACCCATTTGATAAACCCCAAGCATTAATATCAGAAGAAACCTTAGCTGAGAGAAATGCAG TTAGAAAAGATCATATCATTGAATTGTCGTCAACATACAAAGGTTCTTCAGATAAAGGGAATGAAAGTAGAAGAAATGTGTCCTCAAGAACTCTGTCTGC CAGAGTTGGAAGTTTTAGTGCAGTTCATCACAACAAGAAGCAAGGGATGGTTCTTCCTTTCACACCCCTTTCTATCACTTTTGATGAAATCAGATATGCA GTGGACATGCCACAGGTATAAACAAGAACAGATATAAGAAAAGCCCTTTAACGTGGAGAAACAAACTCCAAATCATTAACTTGAAAAGTAGAACTTCTAG CATATATATAGCATTAGAATGTTTCATCCTGAATGCACACACCAAAATATAGTGGCCTATGACATGAAGTTAAC BLAST |
Tissue | flowers |
Gene name | LI_gene_65907; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_99290
Blastp | ABC transporter G family member 39 from Oryza sativa with 42.99% of identity |
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Blastx | Pleiotropic drug resistance protein 1 from Nicotiana with 44.16% of identity |
Eggnog | (ABC) transporter(COG0842) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437694.1) |
Pfam | Plant PDR ABC transporter associated (PF08370.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |