| Id Trinity | FTRINITY_DN57131_c2_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_99609 |
| Sequence | CCGAAACTACCCCCATTTTACCAAATACTCCAGCCACGTGAAAAAGAAAGGGCGTGAGCAAAAAACCCTAAATTCCACTTCCCTCTCTTCTCCAAGCAGT GACGGCGGTAATGGGGGATGCAACGGCGGTGGTGTTTTCTCTTCTCCTCCAGCAGTAGCAACAGTAGGGTCATCAACGGAGAGTGGAGCATGATAATTAG GCCTCAAGGCTCTCACCCTCCTCGTCTCCACTCCTTCGAATCGGTTTAAGTGACCACCACTTTCTCCATCCCTTCGTGTTCCCCTTTTTCAGCTTTGTCT TTGGTGATGACCCACTGTGACTCTCGATCTAGGAGGTAGGCGGCGGTTCGCAGCGATCGTGGCACCAATCGACTCTGGCGGTCGCCAACGAGTCATCAAG GACAGTGAATCTGTATTTGTGCCAATCCATGGGTGGTTCACGGCCAGCTCGGAGTGACTTCCTGTCGCATTTCAACGTCGGAGGGATCCCGAGAGCATTC GATTTGGCTTGGGCATGTCTTCATTGGATTTTATACTCATGGAGCCAGCTGAAGCTGTGGGGGTTGGCGGTGGAAAGTGGACTGATCAGGAGACTCTCCT ACTCTTTGAAGCACTAGAACTTTATAAAGAGAATTGGAATGAAATTGCCGAACATGTTGGAATAAAACCAAAACCGCAATGCATACTACACTTTATTCAA ATGCCAATAGCGATTCCTTTATTGATTCTGATGATGATGATGTTTATTAAGCCCCAAAATAATAGTGGTTCCCAGTTGGTGACCATCCTGGTAACTTCGT TTTCATCAAAATCTCGTTTTTTATTTATATTTGCAATTTGGTAACTATATTGTCATTTTGGTTCTCTCTCTTTTTTAATTTGATATATTCATGTGAGTCT TACACAAATTCTTCATTTTTTCTGTGTGTCTATCTAGTTTGGAAATATGAGGGTGGTAAGGATTTAATATTGAGAGTAGGGAAAGAAGATTATACAAATT GCAGCATATCAAATCCAATTAAGGTGTACAATGATGGGAACACTAAGGTGAAGCTTGACCGTCCTGACTCATTCTACTTCATAAGTGGAGCAAAGGGTCA TTGTGAGAAGGGTCAAAAGCTCATTGTGGTGGTTATGACTCCAAGAGGCTCCAACACCGTTATTTCCAATGCACTTTCTCCAGCTCCAAGTCAGAACCTT GAAGGTGGTCCAACACCTAGTCCTACTGGCACTGCCACTTCTTTGAAAACTTGTGGCCTTCTAATTCTAGCTGCATTTGTGGCTATGTGGTTTTTTTTAT TTGGGATTTTGCTCTATTTTATAATATATTCAATATAAAGACTGTCACAGTGTGGTGATTGTAAGTCTTGTTTCTTTTTTAAGGAATTATTTATATTAAA TTTATTATATTTGAAAATTTGATATTTGACTCTTGTTATGATCTCTCAGCCTTTTCCAATAGCTCATTTGAAACTAATCACTTGAAACTTGTTACTTGTC ATGCTCATTTGAGTGCAATATATGTTTAAAGAGAAAAAAGAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66111; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_99609
| Blastp | SWI/SNF complex subunit SWI3D from Arabidopsis with 81.36% of identity |
|---|---|
| Blastx | Early nodulin-like protein 1 from Arabidopsis with 59.52% of identity |
| Eggnog | SWI SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member(COG5259) |
| Kegg | Link to kegg annotations (AT4G34430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447587.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |