| Id Trinity | FTRINITY_DN57136_c1_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_99337 |
| Sequence | GTTCCATTGAGATAGAGGGTGAGCTTCGGCGCAACAGTAAGGTTGCTTGCCTTGTGACCTCGAGGTCATAGGTTCATGGAAATAGCCTATTTGCTTGAGA AGGTAAGGCTATGTATATCTACCCTCTCTAGACCCCACTAGGTGGGAGTCTCATGCAGTGGGCTGTCCAATTTAGTTGACATGTTTTGTCTAGTTTTCCA TTCATTTTCTTCAAGCTTTCTCTTTTGTCTGACCATGTCTACAATGTGAAGTAAATGACTGGATGTTCACTTGGGCAGATATGACTTGTATAATGGTCAT CTTCCGTTTTCTTTCATGATTTGATAACATTGTCTTACCCTTAATCACTATCAGCGACGTAGTCTGACTGTGATATACCATTTTTCGGTGGCTTTCACGC TTACTGAAATACTTATGCAATTCTGCCAGCATTTCTGCATACCATCCAGTGATCTACCATTACTAAACCGAACTTTATATAGTCTATTGTTAATTTTTCA TAAAGGCTCACTGCAACAGCTAACATGTTTGCCATCTCCTATAGTACCTTTAATGTTTTATTTTACCAAACCAACACAACTTTTGCTTTAGGAATTATGT CATCTCAACTGGTCATAATTTCCATAAACAGTAAATGGGTATTCAAAATGGTGCATGTCAGTACTGTATATCACCCATTTAATGTCAGCTTAGGGTAATT AAAATAATTTGAGATTTTTATCATATCAGGAATCACTTGTTTTTTAATGTATTCAACCAATTTCTCTGTTCTTTTCTAAGGTGATATTGGCAACTAATAT TGCTGAGACATCGGTAACGATTCCTGGAATCAAGTACGTAATAGATCCTGGATTGGTCAAAGCGCGCTCCTATGACCCTGCCAAGGGCATGGAATCTTTG AATGTAGTACCTACATCCAAGTCTCAGGCTCTGCAAAGAAGTGGGCGTGCAGGGCGTGAAGGACCTGGAAAATGCTTCCGTCTATATCCAGAAAATGAAT TTGGTAAACTCGAGGATTCAACCAAGCCAGAGATTAAGCGGTGCAATCTTTCTAATGTCATTTTACAGCTCAAGGCTTTGGGTGTTGATGACATATTAGG GTTTGATTTCATTGAGAAACCTTCAAGGGCAGCTATTATCAAATCATTGGAGCAGCTGTTTTTGTTAGGTGCTCTAACAGATGAGTGTCGGCTATCTGAT CCAGTTGGATATCAAATGGCCCGGCTACCCTTGGACCCTGTTTATTCCAAAGCTCTTATTTTAGCTAGTCAATTTAACTGCTTGGAAGAGATGTTGATAA CCGTTGCAATGCTGTCTGCGGAGTCCATATTTTATGCTCCCCGTGACAAGTTAGACGAGGTTTAAGATTTGACTGTATTACATTCCTGTCATATTCTTCT TGAATCTTATGATGAAACATAAATACAACGATGCATATGTGATTATATACTACAGTAGTCCACTCTATTGACCATTTTGCAACAACGTTTAAGTATCATA TTGATGGTTCATCCTGAAAACAACCCCTTTCACTCGTGAGGGTAAGGCTGCACACATGTCCCCCTCCCAAACATCACCTATAACCAACTAGGTAGAAGCC TCATGCACCAGATCACCATTTTTTAATCATTTCCATGGTTAAAATATGTGCAACAATGAGTAACCACTTAGGGATTTTCAAGTCTTTGTATATTTTCAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66143; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_99337
| Blastp | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 from Arabidopsis with 79.62% of identity |
|---|---|
| Blastx | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 from Arabidopsis with 77% of identity |
| Eggnog | helicase(COG1643) |
| Kegg | Link to kegg annotations (AT1G26370) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434270.1) |
| Pfam | Helicase associated domain (HA2) (PF04408.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |