Id Trinity | FTRINITY_DN57143_c0_g1_i4 |
---|---|
Name Transcript | Ll_transcript_100470 |
Sequence | ACAGAACCTCTCTCATCAGATCCAAACCAACCATGGAACTAGAAGCACCACAAGTGACCAAATGGGAAGGTTATGTAAACTGGAGGAACAAGCCTGCTCT CAGAACCCACCATGGTGGCATGCTTGCAGCTTCCTTTGTTCTGGTTGTTGAGGTATTAGAGAATCTTGCCTTTTTGGCCAATTCAAGCAATTTGGTGTTG TACCTAAGACAATACATGCACATGTCTCCTTCAAAATCTGCAAACAATGTCACCAATTTCATGGGAACAGCTTTTCTTCTTGCTCTTCTTGGTGGTTTCT TATCTGATGCTTTATTCACCACTTATCACATCTACCTCATAAGTGCACTTATTGAGTTCATGGGGTTGATTGTACTAACTATACAAGCTCGCATACCTTC ACTAAAACCACCAGAATGTGATAAAATTACCACATGCATTGAAGTTAGTGGTGGAAAAGCAGCAATGTTGTTTTCTGGCTTATATCTTGTAGCACTTGGA GTTGGAGGAATTAAGGGATCATTGGCAGCACATGGTGGAGAGCAATTTGATGAAACTACACCAAATGGAAGGAAGCAAAGGTCAACTTTCTTCAACTACT TTGTTTTCTGCCTATCATGTGGTGCTCTTATTGCTGTTACTTTTGTGGTGTGGATTGAAGATAACAAAGGATGGGAATGGGGTTTTGCAGTATCTACTAT CAGTATATTTGTGTCTATCCCTGTGTTCTTGGCAGGCTCTCCTACTTATAGGAACAAGATCCCTTCAGGAAGTCCACTTACAACCATTTTAAAGGTTCTT GTGACAGCTTCACTGAATAGTTGCATTGGTATAAATTCTAGTAGTGCTGTTGTGAGCCCTTCTAATCATTACTCAGGTAGGAAAGAATCTGAAGAAGAAA TTGGAAAATCAAGCACATCAATTGAAAAACCAACAGCAACCCTCAAATTTCTCAATAATGCTCTTACAAATGAGCCACTTCATTCATCACTAGAATGTAA TGTACAGCAAGTAGAAGATGTTAAGGTAGTACTTAAAGTACTACCAATATTTGCATGCACCATCATGCTAAATTGTTGCCTAGCTCAACTATCCACTTTC TCAGTGGAACAAGCTGCAACTATGAATACCAAACTTGGTTCTCTAAAGGTGCCACCAGCTTCCTTACCAATTTTTCCAGTGGTCTTTATCATGATCCTAG CTCCTATTTATGATCACATTATCATACCCTATGCTCGAAAAGCGACAAAATCCGAGACGGGAATCACTCATCTCCAAAGGATAGGAATTGGATTAGTACT ATCTATAGTTGCCATGGCAGTGGCTGCAATTGTTGAGGTAAAAAGGAAAAGTGTGGCCATTCACTCAGGACTACTTGATGATGCAACAAAACCACTACCT ATCACATTCTTTTGGATTGCATTTCAGTACTTATTCCTTGGTTCTGCTGATCTTTTCACCTTGGCTGGTTTGCTGGAATTTTTCTTCTCAGAAGCTCCAA TTAGGATGAGATCTTTGGCAACATCTCTTTCATGGGTCTCTTTAGCTATGGGATACTACCTAAGTTCAGTGATTGTATCAATAGTCAATACTGCTACTGG TAGCTCCAACCATAGACCATGGCTATCTGGTGCCAACATTAACCATTATCACCTAGAAAGGTTCTACTGGCTCATGTGTCTACTAAGTGGATTGAACTTT CTACACTACCTATTTTGGGCTATTAAGTACAAATATAGAGGAATAGGTACCAACCATTGAAGCAAAGTAAATATTTCAAAAATGGTCTTAAAATAGCACT TTCAGTTTAAGAGTTAATTGCCAAAAATGTAGGATGTAATTGTGTACAGGTGCATGCAAGTATGCAACAGTGTAGAATGGATCTATCAGTTATGTTATTT ATGTAATATTTTGACAAAATTTGTCACAACAATCTATATTTACATACATTACAGTTCTCTACATACACTACTTTGACATATGCCATACCTCAATGTTCAC GAACATGTACATAAATCAAATGTGATCCAAATATTGTCCAGAACTGTTGCAAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_66198; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_100470
Blastp | Protein NRT1/ PTR FAMILY 4.6 from Arabidopsis with 73.73% of identity |
---|---|
Blastx | Protein NRT1/ PTR FAMILY 4.6 from Arabidopsis with 73.73% of identity |
Eggnog | transporter(COG3104) |
Kegg | Link to kegg annotations (AT1G69850) |
CantataDB | Link to cantataDB annotations (CNT0001569) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456595.1) |
Pfam | POT family (PF00854.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |