| Id Trinity | FTRINITY_DN57150_c5_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_100423 |
| Sequence | AAAATTATATATATTATATATTTGTTATTACAAATATGAGAAAAAGTAATCACTTGATTCCTTATTGATTCCTTATTAATGGAGAAGATATTTGATCTAG GGGCATCACAGAAACGTAACACAATTAAAAAAACAAGACTAGTCATTTAACAAAGAGGATAAGGTGTATGATTTATTTAGCATATTCCATTGACATGCCT TGTAAGTTCAATATAATTCCACTATAAGTATATCACCTTTGTGCCTATAAGTACATCATTTTATATCATCATCATTGCATTATTCCCCTTTGCTTTTGAA CTGCCAAAATCTCTTTTTTTTAAGACTTCGATAGAAAAAAGTGAGAGAAAGAGAGGAAGAAAACATAAAAGATGAAACCCAACTTTGCCTTATTGTCCAA GCTTTTGATACTCCAATACCTATCAGCTCTATGTCTTTCTCAAGATTTTGATTTCTTCTACTTTGTTCAGCAGTGGCCAGGAGCATACTGTGACACAAAG CAGAGTTGCTGTTATCCTAAGACTGGAAAACCTGTAGCTGATTTTGGTATTCATGGACTCTGGCCTAACTACAATGATGGTTCATGGCCCTCAAACTGTG ATCCTGACAGTGTCTTTGACAAATCTCAGATCTCAGAACTCATAAGCAGCATGAATGAGAAGTGGCCATCCCTAAGTTGCCCAAGCAGCAATGGCTTTAG ATTCTGGTCACATGAATGGGAAAAACATGGTACCTGCGCAGAATCTGAGCTTGATCAGCGTGAATACTTTGAAACAGCTCTCAAATTAAAGGAGCAAATC AACCTTCTTCAAATTCTCAAGGATGCAGGTACAATATATTATATTATATGTTTTCTTAATTTACTGGTCATAGTTGATAATTATTTGATTTAACCACTAA TTAGTTAAATCTCATATGTAAGGCTATACTTATTGTATAGTTCCAAATGACTATGACACATCTTTACTTTACTCGAAATTAATTATTCCAAACATATTTA AATGGTATGATGTGTAAGGGAATGAGAGAAGTGATATAAAACTTACTTCCCAACATGTCATCTTCATAAAAACTTGTCGGATTAGGCGAATGATTACATT TGACCCATGATTAAAGAATATTTTTTGACTCATGACAATCATAGAAAACTTGAATTCTAATTTCGATATCATATTAAGGTTATATCTCAAAACCAATTGT TAGTAATCCAACAAGTATTTAAATCATGTATAAGAGAACACGACGGACAATGTGGGAGTGTGTTTTTTATCATAAATCATTGACCATCCAATAATTTTCT CTAACCATATAAATGCACGTTTGTAAAACTCTTTCTAATAATTGATTGGCAATGAATTTCAGGGATTGAACCAGATGATGAATTTTACACCCTAGACAAC ATTTCAAATGCTATTAAAAAAGGTACTGGGTTTACACCAGGAATTGATTGTAATAAGGATTCAGCCCATAACACCCAACTTTACCAAGTTTACTTCTGTG TGGACACTTCTGGCTCAAATCTCATTGAGTGCCCTATTCTTCCGAGGAGCAAATGTGGTTCAAATATCCAATTCCCCAAGTTTTAAACAGAGTTTAACTG AGAAAATCATTTTTATGTTATTGTTTTCTTGTCATTGTTTCTTACATTTCACATGGTGACTATTCAGCCACTTTCCTTTGTATGTGCCTTCTACCAATAA AAGTTTATGGGATTTCATTGCAACAGATTGGCAACAAAAAAACAAAGAGGAATTAGTAATGTTATTTAAATTAAAAAATAGTTAAGATAAGAATATGTTT ACACTATCAATCATCTTTCAGTATTTTTGTGGACACGTGAAAAACAATTAGGATATAACTTCATTTTTTTTCTTTTCAAAATGAAATTAAAGTATTGAAG AATGTCACTAACTTGAGCTTGAAGGTTCCTCATGGTCTACATGCTGCTGCTACTGCTGCTACCAAATTCACATCACATAAGTGTTGTGCTGGCGCCAAGG CACATCCTGGTGCGCCTGTGTGCTGCGCCAAGGCACGTCCTGGTGCGCCTGTGTGCTGCGCCAAGGGACGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66274; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_100423
| Blastp | Extracellular ribonuclease LE from Lycopersicon with 71.33% of identity |
|---|---|
| Blastx | Ribonuclease 3 from Arabidopsis with 67.67% of identity |
| Eggnog | ribonuclease T2 activity(ENOG4111M7G) |
| Kegg | Link to kegg annotations (544098) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457112.1) |
| Pfam | Ribonuclease T2 family (PF00445.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |