| Id Trinity | FTRINITY_DN57152_c1_g1_i21 |
|---|---|
| Name Transcript | Ll_transcript_100831 |
| Sequence | ATTAAAAGTGAGAGGGTACTAAATCCCTAACCGCCCAACATTTTGTCAAGCTCCATAGGAATATAAGTACGCTTGGTGCCCGTTACGCTGAAATTATCCT CACTCCGGTTAACGCATTCAATTCATCGCTTGGATTTCGAACCTTAACCCAACCATGGCCGCGGAAACACTACCGTATCAGAACGGCGTTGTTTTAAACG GAAATCTCGGCGCAAATTCTAATACCCCTACCGCCGCCAAAAAATCGCGGGAGAGCGATCGTCGTCGTCGCCGTCGGAAACAGAAGAAGAATAAACAGGC CTCTCAGGAACCAGACCCTAACGCTGCCGAAAACGGTGACGACACGAAGGAGAATACCGATCCTTATCAGGTTGTTGAGCAAGTTGAAATTGAGTATGTC CCAGAGAAGGCAGAATTAGACGAAAGCTTGGATGAGGAATTTAGAAAGATCTTCGAGAAATTTAGTTTCACTGAAGTTACTGGTTCAGAGGATACCGATA AGAAGGACGAGTCTGCAGAAAATGCAAATGCTAGCAAGAAGTCAGACTCTGATTCTGAAGAGGAAGAAAATGATAATGAGAGAAAAGATAAAGGCGGAGT CTCAAACAAGAAGAAAAAGCTTCAACGGCGGATGAAGATTGCTGAACTGAAACAGATTTGCTCAAGGCCTGATGTTGTTGAGGTGTGGGATGCTACTGCA GCAGATCCAAAGTTGCTGGTCTTCTTGAAATCATATCGAAATACTGTACCTGTACCAAGGCATTGGTCTCAGAAGAGAAAATTTTTGCAGGGGAGCGGCT GTGGCAATCACCAATCCTGGACTAGGGAAAAGAGGTATCGAAAAACAACCCTTTCAGCTTCCCGATTTTATTGCTGCAACAGGAATCGAGAAGATCAGAC AGGCTTATATTGAGAAAGAGGACAGTAAAAAGTTAAAACAAAAGCAAAGGGAACGCATGCAACCAAAAATGGGGAAAATGGATATTGATTATCAGGTTCT TCATGATGCTTTCTTTAAATATCAGACAAAGCCGAAGCTGACCTCTCTTGGGGAATTGTATCATGAAGGAAAAGAATTTGAGGTATAATTTATGCTAAAA TTTGAAATCTAAAATACTTACCCATGCCTTCTGAATGTGTTTATTTTTTCTGTTCAAATATTTTGATTTTATTACTTCTATTCTAGAAAATAACTTGGGA ACCCAACAAGTTCATTATCGGATAGGGTATCTATGTATCATTACTATTGATAAACATTTAGAAACTGTCTGTTACCGGAAGCTCACTAAATTTATTATTT GGTTATTTGGTTTACATATTGGAAATTATTGTATTAATGCCGCAAACATATTGTTCAGATGCTGTATTTTGTTAATCAGATCATTATTTTTTTTACTTTT ACCAGACAGGTAATGCACTCATTTCAAGTAATTTTGGTTGAGATGCCGTAAACTCACTATCACTGACATACAGTTTATCTTCAGAAAGCTGAAGATGTAT CTTTTACTTGCCTGTTGGATTTTTCTAATACTGAAGAGCTTTTCTTCCCTTTCATCTCATTATTGATTAGTGGAAAGTATATGAATGCTTTTTTCAGGTC TTTAGTTGTCTCAAGCAAAAAACCATTTTTCTTCAAATGATTGGTCTAAAGATTGCATTACTCATCCTCCTTTTGATGAGACATTTCCATCAAACTGATT AAGTGTCAATACTATTGGCACAATACAAATTGTAAGTTTATAACCTGGTTCTTAATTTATATAATGATATTGTATTGTATGTTGTGCACTGTGCAGGTAA AGTTGAGGGAGATGAAACCTGGCATGTTATCACACGAATTAAAAGAAGCTCTTGGTATGCCAGAGGGTGCTCCTCCTCCATGGCTTATTAATATGCAGAG ATATGGTCCCCCACCATCATACCCTCATCTGAAAATCCCTGGTCTGAATGCTCCCATTCCCCATGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66288; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_100831
| Blastp | Splicing factor 3B subunit 2 from Homo with 44.22% of identity |
|---|---|
| Blastx | Splicing factor 3B subunit 2 from Homo with 68.97% of identity |
| Eggnog | Splicing factor 3b subunit(COG5182) |
| Kegg | Link to kegg annotations (10992) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421552.1) |
| Pfam | Domain of unknown function (DUF382) (PF04037.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |