| Id Trinity | FTRINITY_DN57175_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_100695 |
| Sequence | GTCCACACCAATTATGGAATTATCAGCCCAGAACCTATTTCCCTTTCCCCAAGTCAGCAACAGTTTTCTGTCTTCAAAAGTTCATATTCCATCAAACACA GATCTCACTCTGAAACTTGTTCTTCTCTCATAATCGGTCTGCAATCATGAAGCTTGATACCAGTGGTCTTGAATCATTCTCTACACAAATCGGATTTCAA AGCGACGTCGTTGGAGATATTTCAGCTGCCCCATCATTCGATCTTCCCAATTCAAGCGACTTTGATGGGTTCGTGAAAGAAGCTATTCAGATGGTGAAGC CCGCAAAGGGTACTACAACTCTGGCTTTTATATTTAAGGAAGGTGTTATTGTAGCTGCTGATTCTCGTGCTAGTATGGGTGGCTATATATCATCTCAGTC TGTGAAGAAAATTATTGAAATCAATCCATATATGCTTGGAACGATGGCCGGAGGAGCTGCTGATTGCCAATTTTGGCACAGGAATCTTGGGATTAAGTGT CGGTTGCATGAGTTAGCAAACAAGAGGAGAATTTCAGTGACAGGAGCCTCAAAGCTCCTTGCAAATATTTTATACTCTTATCGTGGAATGGGATTATCTG TTGGTACCATGATTGCTGGGTGGGATGAGACGGTAACTTAAACGTTCCAATTAGTAGCATTTGTGCTGGTGGTTCTACACTTCTATTGTGTTCATAATGG ATCACTTTTCAGGGTCCTGGTCTGTATTATGTTGATAGTGAAGGAGGAAGACTGAAAGGCACTCGATTCTCTGTTGGATCTGGTTCACCATATGCTTATG GTGTACTTGACAGCGGGTTAGTTAAAGTGTTTTGCTTTTCTATACATCACCTAGAGCTCTTCTGCCAATTTTCATCAACATTTTTCTTGTACTACTAGGT ACAAATATGACCTGTCAATTGAGGAAGCTTCTGAACTGGCTCGGCGAGCAATTTATCATGCAACATTTCGCGATGGAGCTAGTGGTGGAGTTGCTAGTGG TACGTTTTCTTTCTTCCCTATAAAGGACCTGCAGGCTGCATCTTCATATGTATGCTGTTGACATTTCATTTCTCCCCCTCCCACCAACTGGAAAAAAGTT AGACATGCTTGTGCATAGTAACTTATTTAATGTCTTGTGTGAGGCACACTTGCAATTGTGTTTGAGCACAATTATCATGTGCTTGCTCAAGACCACAACA TGCATGGGTTCTATCTGTTCATGAACAAGTCATTTAAAGATTAAAATATAGTCTATACTTTCAAACTGGGTAGGGTGAAATGATTGAAAACATGCTTAGC GTTTAGCAATTATGCAACAATTTATACAAGTACATCATCGTAGTAACCACCGACCAGGTCAGCATTTCCACCAGCTATTGTAGACTCATAATGAATAGCA TGTATTTGTATACATGAAACCATTATCTCACTAATCTTTGGATTTATATGATTATAGTGTACTATGTGGGACCAAATGGATGGAAGAAATTGTCTGGTGA TGATGTTGGGGAACTCCATTACCATTATTACCCAGTTACCCCAAGCACTGTTGAACAAGAAATGGCTGAGGCTCCCAGAGTTTGATGGAAATTAGACATG CGGATGTCTTCTAAGTTTCAGTTACTTGCCTGCTTTCTTAGTCAAACTAAACATGAAACTTTATTGATTTTGGATTCAGAAATTGATATTACTTTTGATC TTGATGTATATTAGATCATTAGTGCTGATACCAAAACTATTTCCCATATTCATCTCTGACCTCAAGTCTGCTTCCCCAACCCCACAAGGGAGAGCTGCAC TTTTCTTAGTATTCTCTAGTGGTTAAAAACTTGAAATGCCAAATATCATTTTAAATGGGAAAGAAATGAAGGCTCTCTCTCATTCATAAAGATCTTAAAA TTTTAAATAAACAAACTTATGACAATTGAAAACAAAAAATTGGGATAGAAAAAAAATAACCAAGTACAATAACAACAAAACCAGTCAGCCTGAGATTTAG AGTCTGGTATTGTTATTGTTATAATTCAGTAATACATTGCTAAAATTGGTTCATTAAAAATTGCTTGATTTCTGTATACAGCTGAATATGACAAAGATAA AGATAATTATCTCAGTTAGTGAATCAACTGGATCATTATTTATCTAAATTTATGCACATTTTAAACCCTAAAGTTTGAGGTAGTCGAATTAGTTTTCAAA AGTCATTTGATTCAAATACATAAACATGATTAAAATATTAAGTCTATTACAATTTAAAGGAGAAATTTATATATATTCATGTTAATACATATTCATGTAT TCATACAGGTATATTGTCCCAAGTGCACAAACTTGTCCTATCACCATGTTAATGTAAACAAAAAAAAGTAACAAGAAATAATCGGACATGATAGAAAATT GAAATTAATTTATCGTGAATGTAGTGGATATAGAAGAAAATAAATCTAACAACTTAATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66445; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_100695
| Blastp | Proteasome subunit beta type-5-B from Arabidopsis with 84.76% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-5-B from Arabidopsis with 84.76% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XQRP) |
| Kegg | Link to kegg annotations (AT3G26340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463074.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |