| Id Trinity | FTRINITY_DN57175_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_100696 |
| Sequence | GTCCACACCAATTATGGAATTATCAGCCCAGAACCTATTTCCCTTTCCCCAAGTCAGCAACAGTTTTCTGTCTTCAAAAGTTCATATTCCATCAAACACA GATCTCACTCTGAAACTTGTTCTTCTCTCATAATCGGTCTGCAATCATGAAGCTTGATACCAGTGGTCTTGAATCATTCTCTACACAAATCGGATTTCAA AGCGACGTCGTTGGAGATATTTCAGCTGCCCCATCATTCGATCTTCCCAATTCAAGCGACTTTGATGGGTTCGTGAAAGAAGCTATTCAGATGGTGAAGC CCGCAAAGGGTACTACAACTCTGGCTTTTATATTTAAGGAAGGTGTTATTGTAGCTGCTGATTCTCGTGCTAGTATGGGTGGCTATATATCATCTCAGTC TGTGAAGAAAATTATTGAAATCAATCCATATATGCTTGGAACGATGGCCGGAGGAGCTGCTGATTGCCAATTTTGGCACAGGAATCTTGGGATTAAGTGT CGGTTGCATGAGTTAGCAAACAAGAGGAGAATTTCAGTGACAGGAGCCTCAAAGCTCCTTGCAAATATTTTATACTCTTATCGTGGAATGGGATTATCTG TTGGTACCATGATTGCTGGGTGGGATGAGACGGGTCCTGGTCTGTATTATGTTGATAGTGAAGGAGGAAGACTGAAAGGCACTCGATTCTCTGTTGGATC TGGTTCACCATATGCTTATGGTGTACTTGACAGCGGGTACAAATATGACCTGTCAATTGAGGAAGCTTCTGAACTGGCTCGGCGAGCAATTTATCATGCA ACATTTCGCGATGGAGCTAGTGGTGGAGTTGCTAGTGTGTACTATGTGGGACCAAATGGATGGAAGAAATTGTCTGGTGATGATGTTGGGGAACTCCATT ACCATTATTACCCAGTTACCCCAAGCACTGTTGAACAAGAAATGGCTGAGGCTCCCAGAGTTTGATGGAAATTAGACATGCGGATGTCTTCTAAGTTTCA GTTACTTGCCTGCTTTCTTAGTCAAACTAAACATGAAACTTTATTGATTTTGGATTCAGAAATTGATATTACTTTTGATCTTGATGTATATTAGATCATT AGTGCTGATACCAAAACTATTTCCCATATTCATCTCTGACCTCAAGTCTGCTTCCCCAACCCCACAAGGGAGAGCTGCACTTTTCTTAGTATTCTCTAGT GGTTAAAAACTTGAAATGCCAAATATCATTTTAAATGGGAAAGAAATGAAGGCTCTCTCTCATTCATAAAGATCTTAAAATTTTAAATAAACAAACTTAT GACAATTGAAAACAAAAAATTGGGATAGAAAAAAAATAACCAAGTACAATAACAACAAAACCAGTCAGCCTGAGATTTAGAGTCTGGTATTGTTATTGTT ATAATTCAGTAATACATTGCTAAAATTGGTTCATTAAAAATTGCTTGATTTCTGTATACAGCTGAATATGACAAAGATAAAGATAATTATCTCAGTTAGT GAATCAACTGGATCATTATTTATCTAAATTTATGCACATTTTAAACCCTAAAGTTTGAGGTAGTCGAATTAGTTTTCAAAAGTCATTTGATTCAAATACA TAAACATGATTAAAATATTAAGTCTATTACAATTTAAAGGAGAAATTTATATATATTCATGTTAATACATATTCATGTATTCATACAGGTATATTGTCCC AAGTGCACAAACTTGTCCTATCACCATGTTAATGTAAACAAAAAAAAGTAACAAGAAATAATCGGACATGATAGAAAATTGAAATTAATTTATCGTGAAT GTAGTGGATATAGAAGAAAATAAATCTAACAACTTAATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66445; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_100696
| Blastp | Proteasome subunit beta type-5-B from Arabidopsis with 85.24% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-5-B from Arabidopsis with 85.24% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XQRP) |
| Kegg | Link to kegg annotations (AT3G26340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463074.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |