| Id Trinity | FTRINITY_DN57175_c0_g1_i23 |
|---|---|
| Name Transcript | Ll_transcript_100708 |
| Sequence | GTCCACACCAATTATGGAATTATCAGCCCAGAACCTATTTCCCTTTCCCCAAGTCAGCAACAGTTTTCTGTCTTCAAAAGTTCATATTCCATCAAACACA GATCTCACTCTGAAACTTGTTCTTCTCTCATAATCGGTCTGCAATCATGAAGCTTGATACCAGTGGTCTTGAATCATTCTCTACACAAATCGGATTTCAA AGCGACGTCGTTGGAGATATTTCAGCTGCCCCATCATTCGATCTTCCCAATTCAAGCGACTTTGATGGGTTCGTGAAAGAAGCTATTCAGATGGTGAAGC CCGCAAAGGGTACTACAACTCTGGCTTTTATATTTAAGGAAGGTGTTATTGTAGCTGCTGATTCTCGTGCTAGTATGGGTGGCTATATATCATCTCAGTC TGTGAAGAAAATTATTGAAATCAATCCATATATGCTTGGAACGATGGCCGGAGGAGCTGCTGATTGCCAATTTTGGCACAGGAATCTTGGGATTAAGTGT CGGTTGCATGAGTTAGCAAACAAGAGGAGAATTTCAGTGACAGGAGCCTCAAAGCTCCTTGCAAATATTTTATACTCTTATCGTGGAATGGGATTATCTG TTGGTACCATGATTGCTGGGTGGGATGAGACGGGTCCTGGTCTGTATTATGTTGATAGTGAAGGAGGAAGACTGAAAGGCACTCGATTCTCTGTTGGATC TGGTTCACCATATGCTTATGGTGTACTTGACAGCGGGTACAAATATGACCTGTCAATTGAGGAAGCTTCTGAACTGGCTCGGCGAGCAATTTATCATGCA ACATTTCGCGATGGAGCTAGTGGTGGAGTTGCTAGTGGTACGTTTTCTTTCTTCCCTATAAAGGACCTGCAGGCTGCATCTTCATATGTATGCTGTTGAC ATTTCATTTCTCCCCCTCCCACCAACTGGAAAAAAGTTAGACATGCTTGTGCATAGTAACTTATTTAATGTCTTGTGTGAGGCACACTTGCAATTGTGTT TGAGCACAATTATCATGTGCTTGCTCAAGACCACAACATGCATGGGTTCTATCTGTTCATGAACAAGTCATTTAAAGATTAAAATATAGTCTATACTTTC AAACTGGGTAGGGTGAAATGATTGAAAACATGCTTAGCGTTTAGCAATTATGCAACAATTTATACAAGTACATCATCGTAGTAACCACCGACCAGGTCAG CATTTCCACCAGCTATTGTAGACTCATAATGAATAGCATGTATTTGTATACATGAAACCATTATCTCACTAATCTTTGGATTTATATGATTATAGTGTAC TATGTGGGACCAAATGGATGGAAGAAATTGTCTGGTGATGATGTTGGGGAACTCCATTACCATTATTACCCAGTTACCCCAAGCACTGTTGAACAAGAAA TGGCTGAGGCTCCCAGAGTTTGATGGAAATTAGACATGCGGATGTCTTCTAAGTTTCAGTTACTTGCCTGCTTTCTTAGTCAAACTAAACATGAAACTTT ATTGATTTTGGATTCAGAAATTGATATTACTTTTGATCTTGATGTATATTAGATCATTAGTGCTGATACCAAAACTATTTCCCATATTCATCTCTGACCT CAAGTCTGCTTCCCCAACCCCACAAGGGAGAGCTGCACTTTTCTTAGTATTCTCTAGTGGTTAAAAACTTGAAATGCCAAATATCATTTTAAATGGGAAA GAAATGAAGGCTCTCTCTCATTCATAAAGATCTTAAAATTTTAAATAAACAAACTTATGACAATTGAAAACAAAAAATTGGGATAGAAAAAAAATAACCA AGTACAATAACAACAAAACCAGTCAGCCTGAGATTTAGAGTCTGGTATTGTTATTGTTATAATTCAGTAATACATTGCTAAAATTGGTTCATTAAAAATT GCTTGATTTCTGTATACAGCTGAATATGACAAAGATAAAGATAATTATCTCAGTTAGTGAATCAACTGGATCATTATTTATCTAAATTTATGCACATTTT AAACCCTAAAGTTTGAGGTAGTCGAATTAGTTTTCAAAAGTCATTTGATTCAAATACATAAACATGATTAAAATATTAAGTCTATTACAATTTAAAGGAG AAATTTATATATATTCATGTTAATACATATTCATGTATTCATACAGGTATATTGTCCCAAGTGCACAAACTTGTCCTATCACCATGTTAATGTAAACAAA AAAAAGTAACAAGAAATAATCGGACATGATAGAAAATTGAAATTAATTTATCGTGAATGTAGTGGATATAGAAGAAAATAAATCTAACAACTTAATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66445; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_100708
| Blastp | Proteasome subunit beta type-5-B from Arabidopsis with 86.64% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-5-B from Arabidopsis with 86.64% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XQRP) |
| Kegg | Link to kegg annotations (AT3G26340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463074.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |