Id Trinity | FTRINITY_DN57181_c0_g1_i1 |
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Name Transcript | Ll_transcript_99022 |
Sequence | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTTTCTCGTTCCTTTACTTTTCAATAATCCAATAAATAACATTATATAGACT TGAAAATAATCACACATACCATCATCATTCATCATCTTCAGAATTCCTTGGCATCAGAGAATTGAGGATATGATGGTGGCTATGATGTATAGAGGGGAGT AGAACTAGGGTTGGTGTTCAAAATGAGAAGGGAGCTAAAAGAGGGATGCCGAGCTTCGATTCTCAGTTACCCATTTCAAATGCACTCTATACAAAGGGGA GCACAATCGATTCTTTTCATATTTCTGACTTTGGAGCATTTGATCAATCATACCGCATAGAGAATACTGTTTATCTGAGTAGAAGTAAGTACTCCTGTGC ACCAACATGGTGAAGTTTACATGTAACAAACATATAATGATATGTTGTATAATTATCAAATCATCTTTACAGAAACATATTTTTTATCTGTCTAAATGAT GCTTAATTATCATTTATTCAAAAAAGAGAAATACTAGGGATCTGTGTAATGGTTGCTTTTTGCAAGCTGTCAGTGTGTAGCTACATGGCAAAATTTGCAT TAAGAAAAGGAATAATTGCACTCGCACAGACATACCCATTCACTAATGTACACATGATGTTGCTGTTGGCTAAATAGCTGGATATTCATGTCTATCATCT TGCTCATTTTTTTGAACTCTCGCTTACAAGTATAGACTTTTTTCTCCAGCTTTTCAGTCTCTAATTAATACTCGTGATATATGATTCAGATTCAACTATT AATTTACTAAGTAGCGAATCAATTTCACGTGGTCCTGTTGATAAGGTGAGTTTTTAAAGTTATTTTCAACTGACGAGATTCCATATTTGGTAACTAAGGT GAATCTTAGCTTGCTGCTGGCTACAGTATGTCTTATAAGAACTTTTCTCTTTTTCTCTTTAATTTAGTTGACAACTTCACTTGATAAAAGCCCATTGACG AACCAAACAGAGCCTCATAGGTTGCAATTTCAAAAGGAAAAGGTTCAATCATCAAATCCTCTTACTATATTAATTGGTAATACTGAAAACTGGGAAGAGT CTGCCATGGCTGATGCCAGTCCTAGGACTGATATTTCTACAGATGCTGACACCGATGACAAGAATCAGCGGTTTGATAGAAGTCAATCTCTTGCTGGTGT GGCTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGAGTCTCCGCAGGCTTGCTCAGAATCGTGAGGCAGCAAGGAAAAGTCGTCTGAGA AAGAAAGCTTATGTCCAACAGCTGGAAAGTAGTCGTTTGAAGCTGACCCAGCTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAGTCTTCATATCAA GCTCGGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCGATGCAGTTTGACGCTGAATATGCAAGGTGGCAGGAAGAGCAGAATCGGCAAATTAATGA GCTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACGGAACTCCGCATGATAATTGATGGTATATTGGCACATTATGATGAGATTTTTAGGCTGAAAGGT ATTGCAGCTAAGGCTGATGTTTTCCATTTGTTGTCTGGAATGTGGAAAACACCCGCCGAGAGATGTTTTTTGTGGCTAGGTGGTTTTCGGTCATCTGAAG TCCTTAAGCTTCTAGTAAATCAATTGGAGCCTCTCACGGAGCAGCAGGTGGCGGGTATCACCAACTTGCAGCAATCATCACAACAAGCAGAAGATGCATT ATCTCAGGGCATGGATGCATTGCAACAGTCCCTTGCTGAGACATTGTCTACCGGATCGCAAAACTCATCCGGTTCATCCGGGAATGTGGCAAATTACATG GGTCAAATGGCAATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTTATTCGACAGGCTGACAATCTGCGGCAGCAAACTCTACAACAAATGCACCGTA TACTGACAACTCGTCAGTCGGCCCGTGCTCTCCTTGCAATACATGACTATTTTTCACGGCTTCGTGCTCTCAGTTCGCTCTGGCTTGCCCGCCCAAGAGA TTGATGTGTGGTAAATGTTTGTTAAAAGTTAATTTAATAGGTCTTTCACCATCAATACTTGATCATTGTAGGTTTTACTTTTAATAAGTTTTATTGTATT GTATTGTAGTTTTAACAAGTTTTTTTTGTAAAGTAGTATGGTAATAGTGTCCATTGTAATTGTTGCTGAAGGACTTTTGGTTTCAATACAAAAAAATAGG GTTACATATGATAAGTTTTAAGGGTTGGTTCAGCTGACACATTGATTTGTGATT BLAST |
Tissue | flowers |
Gene name | LI_gene_66509; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_99022
Blastp | Transcription factor HBP-1b(c1) from Triticum with 79.64% of identity |
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Blastx | Transcription factor TGA2.2 from Oryza sativa with 80.56% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000028) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449313.1) |
Pfam | Basic region leucine zipper (PF07716.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |