Id Trinity | FTRINITY_DN57189_c0_g2_i3 |
---|---|
Name Transcript | Ll_transcript_100857 |
Sequence | TTCTCTTGCAAATATTTCCATCATTCTTGCTTTATTCATTTAACCCCTTCATGTTTTTTCCTTTATGTTCTCTTCAACCTGAATCCACAATAAAATATAT ACTCCATCAACTTACATATACACACATCCCTTAAAGACATAGGTATATTATAACATAGAAGTAAAGCATAATCATAGTTCAAGCAAAACTCACTATATCT GCTAAGAACATGGTAAGGTATGAGTACACCATCACCTTTTTCCTTAGTATTATGCTTTTCTTTTGTTTCTGTCCAATGGTATTATCTCTGCTATCTCAAA ACCAAACAAACACCATGATCACACTCTCCAAGATTCTTAATTCTTCTGTTCCAATATGGAATATCATAAATGAACCAAAGCCATGTTCATGGGAGGGAGT TATTTGTGATAGTAGTGGTTCATTTGTGATTAGTATTACTCTATCTAAGTACACTCTCACTTCTAATAATTTTCTTCCTGATCTTTGCCAAATTGAAACT TTGGAGAATCTTGATGTCTCAAACAACCAACTTACCTCAATCCCTGAGAGGTTCATCACTGAATGTGGAAAAAATAAAGAGTTGAAGTTGCTGAATTTTT CTAGAAACAACTTGCAGGGTGTTTTACCAACTTTTCATGGTTTTGTTGGATTGGAATCATTGGATTTATCTTACAATCAATTTTTGGGAGGGGCTATTGG TTTTGAGCTAGATGAACTTGTTAGCCTTAAGAGTTTGAATCTCAGTTTCAATTCCTTCAATGGATCTATTCCTACCAACCTTGGAAAGTCAATGGTATTG GAGAAGCTTATGCTTTCTGTCAATAGTTTTAGTGGAAAAATTCCTGATAGAATATTGAGTTATAGAAATTTAACTGTGATTGATCTGAGTGCAAATAACC TTTCAGGGACTATTCCTAGTGATATTGGAAAGCTATCTAAATTGGAAAGTTTGATTCTTTCCTCTAATGAACTTGAAGGTGAAATTCCAATATCACTCAG GAATATCACAACCCTTACAAGATTTGCAGCAAACCAGAACAAATTCAAAGGTGTTTTACCACCAGGGATCACAACACATCTCACAAGTTTGGATCTTAGT TATAATTACTTAATGTCTATTCCAGAAGATCTTTTATCTCCACCAAAATTGCAGATTGTAGATTTGTCTAATAATCAGTTATCTGGGCCATTACCTGTAA ACATTTCATCTAGCTTAATCAGGTTGAGATTAGGGAGCAATTTTCTGACTGGAAACATTCCTTCTGATGCTTGTTCAAGAGTTAAAAGTTTGACATACTT GGAGCTGGAAAAAAATCAATTGACAGGAGTTATACCAGCTGGCTTGGGTTCGTGCCGGAATTTGACATTGTTGAGCTTATCTCATAACCAGTTTAGTGGA GAATTGCCTCCAGAGCTTGGTTATCTGAGCCAGCTTCAAGTCTTGAAGCTTCAAATGAACAAGATAAACGGTGCAATCCCGGTTCAAGTTGGCCAACTAC AGAAGCTTTCAATACTGAATTTAAGCTGCAATTCTCTGGAGGGATCTATTCCATCTGTGATGATAAATTTGAGCAGCCTTAATTTCCTCAACTTGCAACA GAACAATCTGAGTGGCTCCATACCGACATCCATCGGAAACTTAAAATCACTTATAGAACTCCAACTTGGGAAAAACCAACTAAGCGGTGTGATTCCAAGC ATGCCATCAAGTCTACAGATTGCCTTGAATCTTAGTAGCAACTTTTTTACTGGACCTATTCCTAGCAGTTTTGGTTATTTGACTAACCTGGAAGTCTTGG ATCTCTCAAATAACAGATTTTCTGGTGAAATTCCTAAGGATCTTAGTAGAATGTCATCTTTGACGCAGTTGTTACTTTCTAACAATCAGCTGTCTGGTGT CATTCCAAATTTCGCCTTTTATGTTCACATTGAATCTGGAGGAAATAGAAATCTGGTAAGTAATACTCGACAGGACAATTCAACATCTGCTAAAAAGGGA ATATCCGTGGCTGTAGCAGTTCTCATTGCAATTGCAGCAGCTATTTTTCTCATTGCCCTTGTAACGCTTTTGGCTGTATCAGTCACACGACACATCTACC GGGCTAATGGTGAGCATATACAGCCAAGTGAAGATAACCACCTCCCTCAGGTAATCCAAAGTCACTTGTTAACTCCGAACGGGATCCATAGAGCAAAGAT TGATTTCTCCAAGGCCATGGAAGCGGTTGTCGAGACATCAAATGTTACTCTGAAGACAAGGTTTTCGACTTACTACAAGGCCATTATGCCATCCGGGTCG GTCTATTTTGTCAAGAAGCTGAATTGGAGTGACAAGATATTGGCAGTGGGAAGCAGCAATGATAAATTTGTGAAAGAACTAGAAGTCTTGGCAAAATTGA ACAATTCAAATGTGATGACTCCTTTGGCCTATGTTCTATCCAATGACATTGCTTATGTATTATATGAATTTGTCTCAAATGGTTCCCTCTTTGATATTCT TCATGGAAACATGAGGGACTCTCTAGATTGGTCTAGTAGATACAGTATAGCCGTTGGGGTGGCTCAAGGTCTTTCTTTTCTTCACGGGCATGCATCTAGT CCTATACTTTTAGACTTGTCAAGTAAAAGTATTATGCTGAAGTCCTTCAAGGAGCCTCTAGTTGGGGATATTGAACACTACAAGGTGATTGATTCCTCAA AGAGTACAGGGAATTTTTCTACAGTTGCTGGTTCTGTTGGTTACATTCCTCCAGGTTAGAAACTCCTAAACCTTTTATTCTGTTTAGTTTTTACTTAGTC TATAGATTAACTTTATATAATCATTATAATGTAGGGTTTATGTGGATCAAATTGTTTCTGGCTTCCTTTAAGTTAACATTTTCTTGTAAATATTTAAGCA AAGTAGTTACTAACTCATTTATCTAGTATCAGTTGTGTGGTCTTATCTCAAAGTAGTTTGATCTATCATAGAGCATTATGACGTCTTTCGATTGCGATTC TACCTAATGAGATAAAGGCTTGGTTGTTGTTGTTATAGAAAGGTAAACAATGGGGCACTTGGAAGATCCTATAGAGATCATACTTAGGCTTAAGAAAACA GCTTATGAAAATAATCTATGCTCTTTCTATAAGCTTTTTTTTTACTTTGTAGAAGCTTATATAACCAACCTCTTTCGACATCAATGAGGTTATTGAAAAA ATTATGAAAGTAAGTAACCTTATTCCAAAGAAACTTATTGAATAAACACTTAATTAAGCAGTTTACAGTACACAAACACACAATTCATGTAACACTTACT TGAGCATATAGCTTGCAAATTACATTTAACAACATTTTCTCCCTCATCACCTCACGCATATACTACCAAAATTTAGAATTGAAATTGTAGCTAAGCCACT TTAGTGTAAAAAGCTCTTAACTTAATATGTTTTGGTTGGCAGAATATGCATACACAATGACAATAACAAAGGCTGGGAATGTCTACAGCTATGGTGTCAT TCTGCTCGAATTGCTGACCGGAAAACCGGCAGTGACTGAGGGAACAGAATTGGTGAATTGGGTTTTGTATAATTCAACAAACCAGGATTACATTCTTGAT TTTAATGTCAGAAGAACATCACAGGCTGTCAGAAAACAGATGCTAGCAATTCTCAAAGTTGCTCTTCTTTGTGTTAGTACATCGCCACAAGCAAGACCAA AGATGAAGAGTGTGCTTAGGATGCTCCTAAATGCGAGATGAAATTATATATTTTTCCGAGTTTGCGAGTTGAGTTTTGAAGAGAGGGTTTGGGAGGCCTA AAATATACATATGAGATGATTCTTAAATACTGATTTTCCCTTCATTCATCTTCAAAACTCAACTTATAAACAAACCTTAAAAGATATATTTTCTTATGGG GCATTACATCTATAGAAATGAATCAATTCATGGATAAGATTTGCTCAGTTTTTTTTCTGGTGTGTTAACTTGTACAGTGAATTAGTTTGCTAAGTGAAGA CATAAAATTCATAGGAATAGTATATTTTTCTTTGGGATGGAGACATAGTAAACCTATGGCAGTTAGCAGTTAGTGTTTAGACTTTAGATCCTCCAAGTTT TAGAAGAAAAATAGACTTACCTATACAAATAGATAAAGGCAAAGCAAGTGTTAACTGTCATGTTTGGAGTAATTTTTATATTCCAAGTTTAGCCTTTACT TATACATCTAAATCTATATAATTATCATAAATTCCAATTTAACCCTTCAGAATCCTAACCTCCTTCCAAAACTAACTCCCACATTCAAACCTACTTAGGA TGGGGATCACCTGTCCCAACTTGGTGTCCCCAACCCTGTCCCGCCCAATCACATTCTGCCATCTCATTAAAATTTTCCACATCACTCTTCCACTTAAAAA ATATTACTTACTATTTTTTTATCTGACTTTTCTTTCCCCTACCAACACAACCTTTCTTCTTCAATCCAAGCTTGGTGTTCATGACCTCTCTCTCAACCTC CATTTCATCACTCAACAGATTCAACAGTCACCGCAACATCAACAGCCACCACCGCAACAACAACCACCGCAACATCAACATCAACAGCCACCACTGCAAC ATCAACAACCACCACCACCACCGCCACCGCAACAACAACCACCACCGCAACAACAGCCACCACCACCACCGCCACCGCAACAACAACCGCCACCGCAACA TCAACGGCCACCGCAAATGTGAGTTAAAATTGCATATGAGATGTTTGATGAATTGCTCAAGAGACTGCTTTTCTTAATTTTTGTTCAATGGATTTTTATT CAATTGTTGTTAATGTGCTATGCTTTTGTTAACATTGATTTATATGAGTTGTGGTTGCTCGTTACATTTTAGAGGTAAACGCAAACTATTCATCACTTTT BLAST |
Tissue | flowers |
Gene name | LI_gene_66570; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_100857
Blastp | Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 from Arabidopsis with 36.64% of identity |
---|---|
Blastx | Receptor-like protein kinase 2 from Arabidopsis with 33.67% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT2G41820) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449801.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |