| Id Trinity | FTRINITY_DN57189_c0_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_100864 |
| Sequence | TTCTCTTGCAAATATTTCCATCATTCTTGCTTTATTCATTTAACCCCTTCATGTTTTTTCCTTTATGTTCTCTTCAACCTGAATCCACAATAAAATATAT ACTCCATCAACTTACATATACACACATCCCTTAAAGACATAGGTATATTATAACATAGAAGTAAAGCATAATCATAGTTCAAGCAAAACTCACTATATCT GCTAAGAACATGGTAAGGTATGAGTACACCATCACCTTTTTCCTTAGTATTATGCTTTTCTTTTGTTTCTGTCCAATGGTATTATCTCTGCTATCTCAAA ACCAAACAAACACCATGATCACACTCTCCAAGATTCTTAATTCTTCTGTTCCAATATGGAATATCATAAATGAACCAAAGCCATGTTCATGGGAGGGAGT TATTTGTGATAGTAGTGGTTCATTTGTGATTAGTATTACTCTATCTAAGTACACTCTCACTTCTAATAATTTTCTTCCTGATCTTTGCCAAATTGAAACT TTGGAGAATCTTGATGTCTCAAACAACCAACTTACCTCAATCCCTGAGAGGTTCATCACTGAATGTGGAAAAAATAAAGAGTTGAAGTTGCTGAATTTTT CTAGAAACAACTTGCAGGGTGTTTTACCAACTTTTCATGGTTTTGTTGGATTGGAATCATTGGATTTATCTTACAATCAATTTTTGGGAGGGGCTATTGG TTTTGAGCTAGATGAACTTGTTAGCCTTAAGAGTTTGAATCTCAGTTTCAATTCCTTCAATGGATCTATTCCTACCAACCTTGGAAAGTCAATGGTATTG GAGAAGCTTATGCTTTCTGTCAATAGTTTTAGTGGAAAAATTCCTGATAGAATATTGAGTTATAGAAATTTAACTGTGATTGATCTGAGTGCAAATAACC TTTCAGGGACTATTCCTAGTGATATTGGAAAGCTATCTAAATTGGAAAGTTTGATTCTTTCCTCTAATGAACTTGAAGGTGAAATTCCAATATCACTCAG GAATATCACAACCCTTACAAGATTTGCAGCAAACCAGAACAAATTCAAAGGTGTTTTACCACCAGGGATCACAACACATCTCACAAGTTTGGATCTTAGT TATAATTACTTAATGTCTATTCCAGAAGATCTTTTATCTCCACCAAAATTGCAGATTGTAGATTTGTCTAATAATCAGTTATCTGGGCCATTACCTGTAA ACATTTCATCTAGCTTAATCAGGTTGAGATTAGGGAGCAATTTTCTGACTGGAAACATTCCTTCTGATGCTTGTTCAAGAGTTAAAAGTTTGACATACTT GGAGCTGGAAAAAAATCAATTGACAGGAGTTATACCAGCTGGCTTGGGTTCGTGCCGGAATTTGACATTGTTGAGCTTATCTCATAACCAGTTTAGTGGA GAATTGCCTCCAGAGCTTGGTTATCTGAGCCAGCTTCAAGTCTTGAAGCTTCAAATGAACAAGATAAACGGTGCAATCCCGGTTCAAGTTGGCCAACTAC AGAAGCTTTCAATACTGAATTTAAGCTGCAATTCTCTGGAGGGATCTATTCCATCTGTGATGATAAATTTGAGCAGCCTTAATTTCCTCAACTTGCAACA GAACAATCTGAGTGGCTCCATACCGACATCCATCGGAAACTTAAAATCACTTATAGAACTCCAACTTGGGAAAAACCAACTAAGCGGTGTGATTCCAAGC ATGCCATCAAGTCTACAGATTGCCTTGAATCTTAGTAGCAACTTTTTTACTGGACCTATTCCTAGCAGTTTTGGTTATTTGACTAACCTGGAAGTCTTGG ATCTCTCAAATAACAGATTTTCTGGTGAAATTCCTAAGGATCTTAGTAGAATGTCATCTTTGACGCAGTTGTTACTTTCTAACAATCAGCTGTCTGGTGT CATTCCAAATTTCGCCTTTTATGTTCACATTGAATCTGGAGGAAATAGAAATCTGGTAAGTAATACTCGACAGGACAATTCAACATCTGCTAAAAAGGGA ATATCCGTGGCTGTAGCAGTTCTCATTGCAATTGCAGCAGCTATTTTTCTCATTGCCCTTGTAACGCTTTTGGCTGTATCAGTCACACGACACATCTACC GGGCTAATGGTGAGCATATACAGCCAAGTGAAGATAACCACCTCCCTCAGGTAATCCAAAGTCACTTGTTAACTCCGAACGGGATCCATAGAGCAAAGAT TGATTTCTCCAAGGCCATGGAAGCGGTTGTCGAGACATCAAATGTTACTCTGAAGACAAGGTTTTCGACTTACTACAAGGCCATTATGCCATCCGGGTCG GTCTATTTTGTCAAGAAGCTGAATTGGAGTGACAAGATATTGGCAGTGGGAAGCAGCAATGATAAATTTGTGAAAGAACTAGAAGTCTTGGCAAAATTGA ACAATTCAAATGTGATGACTCCTTTGGCCTATGTTCTATCCAATGACATTGCTTATGTATTATATGAATTTGTCTCAAATGGTTCCCTCTTTGATATTCT TCATGGAAACATGAGGGACTCTCTAGATTGGTCTAGTAGATACAGTATAGCCGTTGGGGTGGCTCAAGGTCTTTCTTTTCTTCACGGGCATGCATCTAGT CCTATACTTTTAGACTTGTCAAGTAAAAGTATTATGCTGAAGTCCTTCAAGGAGCCTCTAGTTGGGGATATTGAACACTACAAGGTGATTGATTCCTCAA AGAGTACAGGGAATTTTTCTACAGTTGCTGGTTCTGTTGGTTACATTCCTCCAGAATATGCATACACAATGACAGTAACAATGACCGGGAATGTCTACAG CTTTGGTGTCATTCTTCTTGAGTTGCTGACCGGAAAACCCGCGGTGACCGAGGGAACAGAATTGGTGAAGTGGGTTTTGCATCATTCAACAAACAAAGAT TACATTCTTGATTTTAATGTCAAGAGAACATCACAAGCTGTAAGAAACCAAATGCTTTCAGTTCTCAAAATAGCTCTTGTTTGTGTTAGTACATCTCCAG AAGCAAGACCAAAGATGAAGAGTGTGCTTAGGATGCTCCTAAATGCTAGATGAAGTTATACTCTTCATGGTTGGAATAAATCTTGAAAGAGATTTTTTTT TATGGAGCATTATATGAAGAAATGAATCAAATGTTGAAAGGTAGATTATCTTATAGGAGGGTTTGCTAAGATCCTTTATGGTGTGTTAACTTGTTCCAAT GAATCAGTTTTGCTAAAGGAGACATATAGCTTATACATATAAATTATATAATGTCTTTTTCTTTGAGATGAACATAGTAAACATTTAGCAGTTAGCATAA TGTTTAGATGTTCTTCTTATATTCAATATATAAAAATGTGTTTGAATCATTTAGGTTATGAAAAATGATAGAAAAAAAGGATAGATATTCTGCAATTAAT GGAGGAAACCTTTTTTTTGAAGGGTGAACTCTTAACAAAAATATAATTGTCTAATCTTATCCTCTTATTTAAATTATTATAATTTATAACCCTATAAATA ATTAAAATTGGCTCAAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66570; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_100864
| Blastp | Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 from Arabidopsis with 38.24% of identity |
|---|---|
| Blastx | Receptor-like protein kinase 2 from Arabidopsis with 34.62% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (AT2G41820) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449801.1) |
| Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |