| Id Trinity | FTRINITY_DN57203_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_52623 |
| Sequence | CTAAAAGGTAAGATTGCCTCTTATTCAATGTCAAGAGTTCTAATTTCAAAAACAAAAACTTGTCTCATACAATGTTTGATGTCAATGATAATAAAACAAG AAAAAAATGTATTAATTTTGTAATTGACATGACATGTTTTCATCGACATATAACAGCGTATGAGACAAGATCTGAGACACCAGATCTCTATTTCTAGTTC ATACAAAATAAAGCTATATTCTATAAAATAAAATGCACCATATGTCTACAGAGCAAAGGCAGCACTGATATGACTATAGAGAAGCAAATGTGTTTGAGAA AAGAGACCTAAAAGTGTTGTGTGGATCAGAATATTATATTCAGATTCAAACAGAAAAGCTTAAAACAAGGCATGACAATGGAAGCAGAAATGGTAGGAGG AGAAGCTTCTCCAATTGTTCATCATCATGAGTCAGATATAGAACTTATTAGTGCTGAAAGGTTACCTCACAGTGGTCAACTAAATGCACCATTGAACAAC CAAAAGCCTAAAGATGAAACAAACTATGTTGAGGTTACCATGGAAATTGAAGGTAACTCTATTGCAATAGATAGTGTTGAAACTGTTGCAGATGAAGAAG AGAAACTTGGCTTGATCGGAAGGAAGCTCGAGAAGAAAGCCTCCTTTGGTGTAGCTGTTATGCAGAATGCTACAATTCGGATGAAGCAGCTGAAGCGTTT AACTTCATTTTCAAAGCAAGCAAAGCGCTACGATAGGAATAAGGCTGCAGCTACTCATGCTCTTAGAGGACTCAAGTTTATCAGCAAAACTGGCGCTGGC GGTGGTGGTGCAGGATGGGCTGATGTTGAGAAAGAGTTTGACAAGCTTACTGCTTCCACTGATGGGTATCTTCCTAGAGCTCTATTTGCGCAATGCATAG GAATGAACAAGGGGTCTGATGCATTTGTTGAAAAGCTGTTTGATACTCTTGCTAGGCAGAGAGGTATTCGAGGGGGTTCGATTAACAAGGTCCAGTTGAG GGACTTCTGGGACAGTATTTCTGACCAGAGCTTTGATTCTAGGCTTAAAACATTCTTTGACATGGTTGATAAAGATGCAGATGGCAGAATCACTGAGGAA GAAATTAAGGAGATTATATGCCTTAGTGCCACTGCCAACAAACTCTCAAACATTCAACAACAAGCAGAGGAATATGCTGCTTTAATCATGGAAGAACTAG ACCCTGATGAGACAGGATTTATCAATATAGACAACCTGGAGACACTCTTATTGCATGGACCTGATCAAACCACAAGAGGAGACAGTAGGTACCTGAGTCA AATGCTAAGCCAAAAGCTTACGACAACATTTGCGGAAAATCCTATCAGGAGGCGGTATATAGATACCAAATACTTCTTACAGGACAATTGGCAAAGAGTT TGGATATTGGCATTGTGGATCGGTGTGATGTTTGGTCTATTTGCTTACAAATTTGTGCAATATAGAAGAAGAGCTGCCTATGAGGTGTTGGGCCATTGTG TATGCATGGCAAAAGGCGCAGCTGAGACACTTAAGTTGAACATGGCTCTTATATTGTTACCCGTTTGCCGAAACACCATCACCTGGCTCAGGAATAAGAC CAAGCTAGGGGTTGCAGTTCCTTTTGATGACAACCTCAACTTCCACAAGGTAATAGCTGTGGCAATAGCAATTGGAGTTGGTATACATGCTATTTATCAT CTTACTTGTGATTTTCCGCGCCTTCTATATGCAAGCAGCGAAAAGTACAAGCTCATGAAACCTTTTTTTGGAGATAAACCATCAAACTATTGGCATTTTG TCAAATCATGGGAAGGAGTAACAGGGATTATAATGGTTCTGCTAATGGCAATAGCCTTCACTTTGGCCAACCCACGGTTAAGGAGAGGCCAGAACAACCT ACCCAAATCCCTTAAAAAACTCACAGGTTTCAATGCCTTTTGGTATTCTCACCACCTTCTAGTTATTGTCTATGCCCTGTTGGTTGTGCATGGGATCAAA CTTTACTTAACTAAGGACTGGTACAAGAAAACGACCTGGATGTACTTGGCTATTCCAATCACCATTTATGCATTGGAAAGACTAGTTAGAGCACTCAGAT CAAGCACTAAGTCTGTGAAAATATTAAAGGTGGCTGTTTATCCTGGAAATGTGTTAGCACTTAACATGTCAAAGCCTCAAGGGTTTACCTACAAGAGTGG ACAATATATGTTTGTAAATTGTGCTGCTGTGTCTCCATTTGAATGGCATCCATTTTCCATAACCTCAGCCCCTGATGATGATTACCTTAGCGTTCACATT AAAATTGTTGGTGATTGGACTCGAAATCTGAAAACTAAATTCTCACAGGCGTGCCGTGCACCCCTGAATGGGCAAAGTGGACTTCTAAGAGCTGAATGCA TGAAAGGAGATAACAGTCCAAGTAATAATCTCCCAAAAGTTATGGTTGATGGTCCATATGGAGCGCCAGCACAAGACTATACACAATATGAGGTGGTTTT GCTGGTGGGGTTGGGAATTGGGGCTACCCCAATGATCAGCATACTAAAGGACATGGTGAATAATTTCAAGGCCATGGAAGAGGAAGAGTGGGATGCAATA GAGGAAGGAAGTGGGGTTGGGGGTGCTAAATCACCATCATCATCAACCCATCAAAAGAAAGCCAGGTTCAACGATTTCAAGACAAGGAGGGCCTACTTCT ACTGGGTTACTAGAGAGCAAAGTTCCTTTGATTGGTTCAAAGGGGTAATGAATGAGGTAGCTGAAGAGGACCAGAGAGGAGTGATTGAACTCCACAGCTA TTGCACCAGCGTTTATGAAGAGGGTGATGCTCGTTCTGCTCTTATTGCTATGTTGCAGTCTATAAACCATGCAAAGAATGGCGTGGACATAGTCTCTGGA ACACGTGTTATGTCTCACTTTGCTAAACCCGATTGGCGCAGTGTCTACAAACGCATTGCGCTTAACCACCCAGATTCTCAAGTTGGTGTATTTTACTGTG GACCAGCTGCACTCACCAAACCGCTACGTCAGCTTTCTTTAGATTTCTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66689; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_52623
| Blastp | Respiratory burst oxidase homolog protein C from Solanum with 64.22% of identity |
|---|---|
| Blastx | Respiratory burst oxidase homolog protein C from Solanum with 63.53% of identity |
| Eggnog | NADPH Oxidase(ENOG410XNZY) |
| Kegg | Link to kegg annotations (102598898) |
| CantataDB | Link to cantataDB annotations (CNT0001034) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458076.1) |
| Pfam | Respiratory burst NADPH oxidase (PF08414.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |