| Id Trinity | FTRINITY_DN57206_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_54040 |
| Sequence | ACCTGAAATTGGTGCAATCATATATAGAATGTTAAATCCTTCCAGCTATCATACTTTCTGGTCATAGAGTGGGCTAAAGTTGTCTAACAGGATAAAACAA AAACTAGTGAAACACTAACCAAAGTTTTCTATTCACTTATAATAAAAATATACTGTTTTCTTTCTGACATGCGTGCCCGTCCGGGATTCATGGACTAGGG CAGTTAACACCTAATGATGTATAGTATATAAAGATACACAGAGTGGAATACATTTATATTTTCGAGTTGGAGACTGTTTAATAGACGGATAAGCGACAAT TTTTTTCAGCATGAAGCTGCTTGTGAAGCTTTTAAAGATGCTCAAAAGCAGATGAAAAGCATATCAGAAACAATCAAATCAAAAACCGCCAGCATTTCTC AAATTAAGAGTGACATTGAAAAGAGCAAGTCCGAAGCATCAAAAGCTCACCAAGTGGAAAAAGACTGTATCATAGAACAAGATGAACTCATTCCTCTTGA ACAAGGTGCTAGACAGAAGGTTGCAGAGCTGAAATCTGTTCTAGATTCTGAGAAGAGTCATGGATCAGTTCTAAAAGCGATCTTGAAAGCTAAGGAAACC AAACAGATAGAAGGAATATATGGCCGTATGGGTGATTTAGGTGCTATTGATGCAAAGTACGATGTTGCGATTTCAACAGCATGTTCTGGACTTGATTATA TTGTGGTTGAAACAACAAATGCAGCACAAGCCTGCGTTGAGCTACTTCGTAGAGAGAATCTTGGTGTTGCTACTTTCATGATATTGGAGAAGCAAGTTGA TCTTCTTCCAATGTTGAAAAAAAAAGTAAGCCCTCCAGAGGGGGGTCCACGTCTTTTTGATTTAGTTAAAGTTCAAGATGAAAGAATGAAGCTTGCTTTC CTTGCTGCACTTAGAAACACAGTTGTCGCTAAGGATCTTGACCAGGCCACACGCATAGCATATGGTGGAAATAATGAATTTCGGCGTGTTGTTACTCTTG ATGGTGCACTCTTTGAAAAATCTGGAACAATGAGTGGTGGGGGCGGTAAGCCCCGTGGTGGGAAGATGGGGACATCTATTCGAGCTGCTAGTGTGTCCAT GGAAGCTGTTGCAAATGCTGAGAAGGAATTGTCTGAATTGACTGATAAATTGAATAACATTCGCCGTACAATTGTGGATGCTGTAAAACAATACCAGGCC TCTGAAAAAGTTGTTGCTGCTTTGGAAATGGAGTTAGCTAAAAGCCAGAAGGAGGTTGAGAGTTTGAATTCACAACATAGTTATATTGAAAAACAACTCA ATTCCCTTGAGGCTGCATCAAAGCCACAGGAGGATGAGCTTGATAGATTGAAAGAGCTGAAGAAGATTATTTCTACTGAAGAAAGGGAGATTAATAGACT TACTCAAGGGTCTAAACAACTGAAGGAAAAGGCTTTGGAGCTTCAGAAAAATATAGAAAATTCTGGGGGTGAAAAATTAAAATCTCAGAAGTCAAAGGTC AAGAAAATTCAGTCTGATATTGATAAGAATAATTCAGAGATTAATCGACACAAGGTACAAATAGAGACGGGACAAAAGATGATGAAAAAGTTGACTAAGG GAATTGAAGAGTCAAAGAAGGAGAAAGAACGCCTTGCTGAGGAGAAGGAAAATATGAAAACCATCTTCAAAGAAATAGAACAGAAAGCATTTGTAGTTCA GGAGAATTATAATAAAACACAAGAGCTGATTGACAAACATTGTGTTGTCTTGGGGGAAGCAAAATCTGAGTATGATAAGATGAAAAAAGTAGTGGATGAA TTGCGTGCATCTGAGGTTGATGTTGACTTCAAATTAAAAGACATGAAAAGAGCATTGAAAGAATTGGAGATGAGGGGGAAAGGTTACAAAAAAAGACTTG AAGAGTTGCATACTGCCATTAGCAAGCATCTTGAACAAATTCAAGTAGATTTAGTGGATCATGAAAAGCTGCAGGCTACGTTGTCTGATGAACTTCTTAA TGGGGCTTGTGACCTGAAAAGGGCTCTTGAAATGGTCACATTGCTCGAAGCAGAGCTGAAGGAAATGAATCCAAATCTTGATTCGATTGCAGAATATCGA AAAAAGGTATCATTGTACAATGAGCGAGTAGAAGAACTTAATACAGTAACTCAGGAGCGGGATGATATAAAGAAGCATTATGATGAATTGAGAATGAAGA GATTGGATGAGTTTATGGAAGGATTTAATGCTATATCTTTAAAGTTAAAAGAAATGTACCAGATGATTACACTTGGAGGTGATGCAGAGCTTGAGCTTGT GGATTCTTTGGATCCTTTCTCTGAAGGTGTTGTGTTCAGTGTTAGACCACCAAAGAAAAGCTGGAAAAATATTGCAAATTTATCTGGTGGCGAAAAGACT CTTAGCTCATTGGCTCTTGTATTTGCTCTCCATCATTACAAGCCAACACCACTTTATGTCATGGATGAAATTGATGCTGCCCTGGACTTCAAGAATGTAT CAATCGTTGGGCATTATGTGAAAGACAGGACCAAAGATGCTCAATTCATAATCATCAGCCTTAGGAACAATATGTTTGAATTGGCTGATAGACTTGTTGG GATTTATAAAACTGATAATTGCACAAAGAGCATTACTATCAATCCAGGTAGTTTTGTTGTGTACCAAAAAGCTGTTTGAGTAACTTCTTAGTTTGTTGTT TATCTTAATTGAAGAATACTTACCAGTTTGGTCTTGCATATAATTGTAACCAATAATAGGAAGTTACTATTTCATTCATAAATGTAAGATTACAATGTAA TCAGTGTTGTAAAAACCGTATCGTACCGGTCGGTTCAACCGGAAAACCGGTGAACTGGACCCTAACCGATATGGTACAGGTGTTGAACCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66718; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_54040
| Blastp | Structural maintenance of chromosomes protein 4 from Arabidopsis with 75.71% of identity |
|---|---|
| Blastx | Structural maintenance of chromosomes protein 4 from Arabidopsis with 75.41% of identity |
| Eggnog | Required for chromosome condensation and partitioning (By similarity)(COG1196) |
| Kegg | Link to kegg annotations (AT5G48600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432441.1) |
| Pfam | SMC proteins Flexible Hinge Domain (PF06470.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |