Ll_transcript_54044

• Id Trinity: FTRINITY_DN57206_c1_g1_i14
• Name Transcript: Ll_transcript_54044
• Sequence: GCACTCTCTCAACCTTCGCTTTCTCTCCAATCACTCACCTTTTCAACAGAATCATCCGAAGCAAGTTGATCTTCTTCCAATGTTGAAAAAAAGTAAGCCC TCCAGAGGGGGGTCCACGTCTTTTTGATTTAGTTAAAGTTCAAGATGAAAGAATGAAGCTTGCTTTCCTTGCTGCACTTAGAAACACAGTTGTCGCTAAG GATCTTGACCAGGCCACACGCATAGCATATGGTGGAAATAATGAATTTCGGCGTGTTGTTACTCTTGATGGTGCACTCTTTGAAAAATCTGGAACAATGA GTGGTGGGGGCGGTAAGCCCCGTGGTGGGAAGATGGGGACATCTATTCGAGCTGCTAGTGTGTCCATGGAAGCTGTTGCAAATGCTGAGAAGGAATTGTC TGAATTGACTGATAAATTGAATAACATTCGCCGTACAATTGTGGATGCTGTAAAACAATACCAGGCCTCTGAAAAAGTTGTTGCTGCTTTGGAAATGGAG TTAGCTAAAAGCCAGAAGGAGGTTGAGAGTTTGAATTCACAACATAGTTATATTGAAAAACAACTCAATTCCCTTGAGGCTGCATCAAAGCCACAGGAGG ATGAGCTTGATAGATTGAAAGAGCTGAAGAAGATTATTTCTACTGAAGAAAGGGAGATTAATAGACTTACTCAAGGGTCTAAACAACTGAAGGAAAAGGC TTTGGAGCTTCAGAAAAATATAGAAAATTCTGGGGGTGAAAAATTAAAATCTCAGAAGTCAAAGGTCAAGAAAATTCAGTCTGATATTGATAAGAATAAT TCAGAGATTAATCGACACAAGGTACAAATAGAGACGGGACAAAAGATGATGAAAAAGTTGACTAAGGGAATTGAAGAGTCAAAGAAGGAGAAAGAACGCC TTGCTGAGGAGAAGGAAAATATGAAAACCATCTTCAAAGAAATAGAACAGAAAGCATTTGTAGTTCAGGAGAATTATAATAAAACACAAGAGCTGATTGA CAAACATTGTGTTGTCTTGGGGGAAGCAAAATCTGAGTATGATAAGATGAAAAAAGTAGTGGATGAATTGCGTGCATCTGAGGTTGATGTTGACTTCAAA TTAAAAGACATGAAAAGAGCATTGAAAGAATTGGAGATGAGGGGGAAAGGTTACAAAAAAAGACTTGAAGAGTTGCATACTGCCATTAGCAAGCATCTTG AACAAATTCAAGTAGATTTAGTGGATCATGAAAAGCTGCAGGCTACGTTGTCTGATGAACTTCTTAATGGGGCTTGTGACCTGAAAAGGGCTCTTGAAAT GGTCACATTGCTCGAAGCAGAGCTGAAGGAAATGAATCCAAATCTTGATTCGATTGCAGAATATCGAAAAAAGGTATCATTGTACAATGAGCGAGTAGAA GAACTTAATACAGTAACTCAGGAGCGGGATGATATAAAGAAGCATTATGATGAATTGAGAATGAAGAGATTGGATGAGTTTATGGAAGGATTTAATGCTA TATCTTTAAAGTTAAAAGAAATGTACCAGATGATTACACTTGGAGGTGATGCAGAGCTTGAGCTTGTGGATTCTTTGGATCCTTTCTCTGAAGGTGTTGT GTTCAGTGTTAGACCACCAAAGAAAAGCTGGAAAAATATTGCAAATTTATCTGGTGGCGAAAAGACTCTTAGCTCATTGGCTCTTGTATTTGCTCTCCAT CATTACAAGCCAACACCACTTTATGTCATGGATGAAATTGATGCTGCCCTGGACTTCAAGAATGTATCAATCGTTGGGCATTATGTGAAAGACAGGACCA AAGATGCTCAATTCATAATCATCAGCCTTAGGAACAATATGTTTGAATTGGCTGATAGACTTGTTGGGATTTATAAAACTGATAATTGCACAAAGAGCAT TACTATCAATCCAGGTAGTTTTGTTGTGTACCAAAAAGCTGTTTGAGTAACTTCTTAGTTTGTTGTTTATCTTAATTGAAGAATACTTACCAGTTTGGTC TTGCATATAATTGTAACCAATAATAGGAAGTTACTATTTCATTCATAAATGTAAGATTACAATGTAATCAGTGTTGTAAAAACCGTATCGTACCGGTCGG TTCAACCGGAAAACCGGTGAACTGGACCCTAACCGATATGGTACAGGTGTTGAACCG
• Tissue: flowers
• Gene name: LI_gene_66718;
• Additional information: details;

Expression of Ll_transcript_54044

FPKM

• FPAB: 1.7
• FPNAB: 6.2
• LF1: 7.5
• LF2: 6.6
• LF3: 12.1
• LF4: 11
• UF1: 6.5
• UF2: 7.4
• UF3: 9.4
• UF4: 9.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_54044

• Blastp: Structural maintenance of chromosomes protein 4 from Arabidopsis with 78.52% of identity
• Blastx: Structural maintenance of chromosomes protein 4 from Arabidopsis with 77.96% of identity
• Eggnog: Required for chromosome condensation and partitioning (By similarity)(COG1196)
• Kegg: Link to kegg annotations (AT5G48600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432441.1)
• Pfam: RecF/RecN/SMC N terminal domain (PF02463.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;