Ll_transcript_54057

• Id Trinity: FTRINITY_DN57206_c1_g1_i22
• Name Transcript: Ll_transcript_54057
• Sequence: GATCGACTTCACAATTCAAATTTCAAAACACAAACTCGAACGCTTCCGAGTTGACTCAATGGAACCGAAACCCGAGTCATCACCTACCGAGTCCGACTCA TCTCGAGGACGATCCACCACTCGCCCTAGGCTCTTCATCAAGGAAATGGTGATGCGCAATTTCAAATCCTACGCTGGCGAACAACGCGTTGGTCCATTCC ACAAGAGTTTTTCGGCTGTGGTTGGACCTAACGGGGGTGGAAAGAGTAATGTGATTGATGCGATGTTGTTTGTGTTCGGGAAGAGAGCGAAGCAGATGAG GCTGAATAAAGTTTCTGAGCTTATTCACAATTCCACCAATCATCAGAATTTGGACAGTGCTGGTGTTTCCGTTCATTTCCAGGAGATTGTTGATTTGGAA GATGGAACATATGAGGCTGTTCCAGGGAGTGATTTTGTGATTACCAGGGTGGCTTTCCGGGATAACTCATCTAAGTATTACATTAATGATCGTTCGAGTA ACTTTACTGAAGTTACCAAGAAACTGAAAGGGAAAGGTGTTGACCTTGATAATAACAGGTTTCTGATCCTTCAGGGTGAAGTTGAGCAGATTTCACTCAT GAAGCCAAAATCTCAAGGACCTCATGATGAAGGTTTTTTAGAATATCTGGAGGACATCATCGGTACTGACAAATATGTTGAAACAATTGATGAATCAAAT AAGCAGTTAGAATCCCTGAATGAGAGAAGATCTGGGGTTGTGCAAATGGTTAAGCTATCTGAGAAAGAAAGGGACAACTTGGAGGATGTAAAGAATGAAG CAGAAGCATTCATGTTGAAAGAGTTATCTCTTTTAAAATGGCAAGAGAAAGCTACAAAGTTGGCTGTTGATGATACAGATGGAAAAATGGTTGAGTTACA AGAGAATGTTTCTACCCTAGAAGAAAATCTGAAGGCTGAAAGGGATAAAATTAAAGAAAGTAAACAAACTCTGAAGGAGCTTGAAACTAAGCACAACAAC TACATGAAAAGACAAGAGGAGCTAGATAATGACATGAGGAAGTGTAAGGAAGAGTTCAAGGAGTTTGAGAGGCAGGATGTCAAGCATCAGGAAGATTATA AACATTTGACTCAGAAGATCAAGAAGCTGGAGGACAAAGTTGAAAAGGATTCAAAAAAACTTGAAGCCCTTGTAAAGGAGGGTGAGGACTCAACTGATCT AATACCGAAACTTGAGGATGATATCCCAAAACTGCAGAAATTATTGATCGAAGAGGAGAGGTTGTTAGAAGAAATCATTGAGACGTCCAAAGTCGAAACT GAAAAATACCGCTCTGAGCTTTCTAGAGTCCGTGCTGAGCTTGAACCTTGGGAAAAACAATTGATCGAGCACAAGGGAAAACTTGATGTTTCATCTAATG AGAATAAGCTTCTAAATGAAAAGCATGAAGCTGCTTGTGAAGCTTTTAAAGATGCTCAAAAGCAGATGAAAAGCATATCAGAAACAATCAAATCAAAAAC CGCCAGCATTTCTCAAATTAAGAGTGACATTGAAAAGAGCAAGTCCGAAGCATCAAAAGCTCACCAAGTGGAAAAAGACTGTATCATAGAACAAGATGAA CTCATTCCTCTTGAACAAGGTGCTAGACAGAAGGTTGCAGAGCTGAAATCTGTTCTAGATTCTGAGAAGAGTCATGGATCAGTTCTAAAAGCGATCTTGA AAGCTAAGGAAACCAAACAGATAGAAGGAATATATGGCCGTATGGGTGATTTAGGTGCTATTGATGCAAAGTACGATGTTGCGATTTCAACAGCATGTTC TGGACTTGATTATATTGTGGTTGAAACAACAAATGCAGCACAAGCCTGCGTTGAGCTACTTCGTAGAGAGAATCTTGGTGTTGCTACTTTCATGATATTG GAGAAGCAAGTTGATCTTCTTCCAATGTTGAAAAAAAAAGTAAGCCCTCCAGAGGGGGGTCCACGTCTTTTTGATTTAGTTAAAGTTCAAGATGAAAGAA TGAAGCTTGCTTTCCTTGCTGCACTTAGAAACACAGTTGTCGCTAAGGATCTTGACCAGGTCAGTTATGCTTTTGTAGCGGAATACTCTATTTTGATAAT AAATATCCAGGGCCATTAATCATTATACTGTAATTACCAGTTACTCGCAATGATATAAAATATATAGCTTAGGTTTTAGACAGCACATTTTTAACTTTTC ATATCAGTGAAGGAGACCACTGAATACCAACCTTTTTTTCTACCTCCGCCATATTTTAGGCCACACATATAGCATATGGTGGAAACAATGAATTTGGACG TGTTTTTTACTCTTGATGATGCACTCTTTGAAAAATCTGGAAAGATGAGTGGTGGGGGTGGTAAGCCCCATGATGGGAAGAGGGGGACATCTATTCGGCA ATAATCCCATCCTTGGTCCTCAGTTAGGTGATGAATGTTAAATCTCTTTCTGTTGATCTGAAGATAATTCTTCAGAGACATACAGAAATATTCATCATCA TGAACTTATCAGGAGGAGGAAGAAGCTATCGAGAGAAGAAAGAAATATTAGGGTTTGTAATGTGAGCGAAGCCAGAGACTGTGTGAAGAACCCTACATTT GTATATAGACATACACATATATTTGACATCACGTTCTGCCTTGCACGGGAGTAATAATGTTTGTTTTAATAGAGCATTGCAACCGGAGTAATAGTTTGTT TTAGTAGAGTAAAGAAAATAATTAAATCCATTATGGTGGCCTGAGATCTATCTTTTGTCTGCCCATGTCTAGTACCCTTTAATTTTTTATTTAGCTAAAA AGCATTCCATCCCATGGCATGGTTTCTTTGTTTGATATGGTAGAGTTGAATCTTGAAATCAAGTTAACATTGCAATGCAATTCCTTCTCTCATGGTTTGG ACTGGAGGTAATGTCTAATCCAATTGTGCAACCATAAAATCACCTTTCTTATATTAATTAATGCAGTTCAATTATAAAATTTGCTGAGCAATGCCTAAAT CCAGAAATGAGAGCATCAATTTTTAGTCCTCGGCTTATGGAATTGATGCATTGCATTTTATTCATTTCCATCTTGCACAATTTTAATTTAGCTTCTCTAC CTCTGACCATCAGGGGCTGGGAAAGCATATGCATGCAGTAGCTATGGCTACCACAAAAGTTATTAAAAGTGAATTTTTCACGAGTAATTTTTTATGATTT TTTATGACTTCCCCCTTGAATAAAGTATCATTCTTGGTTTCCTTATTGAAAATGTTCTATCTCTGTCCTAGCCTTCATATTTATTTCAAATGCCTTTCTT TTAGACATTAAATTTAGATGTGTTGTTTTTGCGGCCTTCTGGATTTATTTAAGTAGTACTGTGTGTCCTCGGAAGATGGATGTTCTAAAAGTTAATGCAT TTATAGCTTTATTATTCTAATTATCTACTGCACCATTTTGGCTATACTTTTAGTCAAGTAACTTGCATTTTATTATAAATAAAACTAAGCTGGAATTGCA CTTGGCCTTATTTGGTTGTGTATGACAATATAAATAAAAGTGATTTAAAATGTGCTTTTATTTGAAGGTGTGAGATTAGGATTCCTATTATATTTTAACA ATTTTGGATTTATTTTTAAATCATGTCTCTGTACATGGTTGTCTACCTAGGTTTCACATGTATTACTAACGTAATGTACACAAAACTCAGACTTTTACTA TTGTAGTCATTATTTGCATATTCACTTGGAAATTAATAGGAACTGAACTACTATCATTCTGGAAGATTTATGTTTGGATCTCTCTCTTTTTTTAACAATT CATGACTACCTTGTTCCTCTTAGTGCTAATTGCATTTGCTCAATTAATATTGAAATTCATTGTAGTATATTAGTTGGTTGAATACCACAATATAATTTAA TAACAATGAATGTAGTGTTGTTATGGAGGAGCAATTCATACTTAGAGTTCCACCAAGTGTTGCAGAGCGAATAGAGCGTCTTCTTAACAACAACAACATT AATAATAGTGATGCTCCATCTTCTTCATCTGAGGACAACAAGTCATTAGATTTGTCTTTTAGTGAGGATGGCAGAAGTGGTTCCTTCTTGATTGGCAATG AACGATTCCCAGCATCTCTCTTGGACCTTCCTTGTGTCGTTGAATCGTTTAAAACTTATGATGATAGTTCTTTGATTAAAACAGCTGATATTGCTCAGAT GATTATGGTGAGGGAATCTGGGGATCCTGCTCCAGATGTCATTGAGTACAGACATGGCCTTACCCCTCCCATGAGAGATGCTCGAAAGCGTAGATTTCGC AGAGAGCCGGATCTCAATCCTGAGCTTGTCTCCCGTGTTGAGAAAGATCTTCTCAAAATCATGGCTAGAGGAAATGTCGACAATCTTGATGTGGAAGTAG CTGATCAAGAAGAAGGGGATGAGAATGTTCGAGGTGCTGCTGAGAAACCTGCACCTGCACCAGTCCCAAAACATGATGTTCGGGTGACTCGTACAAATGC TGTGGAGCAAGATAGGAGTGACTCTGATGAATCCGATGACTCAGTTTGAATGAAATATGCACAAAGAATACTTATATTGCTATGTTGAAAGTCTACAAGA ATATGCATAAAGTATATTTGGCTTTTAGAATCACATCCACCATCTTATAGTCTGATACATGGATTTCAATTGCATTTCATTTGTCGAATGGTTAATTGCA TTTTACACCGTCTATGATCATTGAGGTCCTTATTTTCATTTGCATATATGAGAACGTGGGTAAGAATGTACTTGAAGCCAATTTTGCTTCCATTTATAAC CCCCTTCTTCTTTATCAGCTATATGCTTAAAAAACACATTTTTTGACCTTTTCACATGTATGACGTAATTTTATCTTAGGCAAAGCAACAATTACTTCAT TTTTAATCAATTTATTGGAACGATCCGAGAGTGAGTGTGTGTAATTCTTTTATGTCAAAGTCG
• Tissue: flowers
• Gene name: LI_gene_66718;
• Additional information: details;

Expression of Ll_transcript_54057

FPKM

• FPAB: 0.5
• FPNAB: 1.3
• LF1: 3
• LF2: 3.3
• LF3: 2.5
• LF4: 1.4
• UF1: 2.3
• UF2: 2.5
• UF3: 2
• UF4: 1.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_54057

• Blastp: Structural maintenance of chromosomes protein 4 from Arabidopsis with 73.93% of identity
• Blastx: Structural maintenance of chromosomes protein 4 from Arabidopsis with 73.93% of identity
• Eggnog: Required for chromosome condensation and partitioning (By similarity)(COG1196)
• Kegg: Link to kegg annotations (AT5G48600)
• CantataDB: Link to cantataDB annotations (CNT0001234)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432441.1)
• Pfam: RecF/RecN/SMC N terminal domain (PF02463.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;