Ll_transcript_54039

Id TrinityFTRINITY_DN57206_c1_g1_i9
Name TranscriptLl_transcript_54039
SequenceGATCGACTTCACAATTCAAATTTCAAAACACAAACTCGAACGCTTCCGAGTTGACTCAATGGAACCGAAACCCGAGTCATCACCTACCGAGTCCGACTCA TCTCGAGGACGATCCACCACTCGCCCTAGGCTCTTCATCAAGGAAATGGTGATGCGCAATTTCAAATCCTACGCTGGCGAACAACGCGTTGGTCCATTCC ACAAGAGTTTTTCGGCTGTGGTTGGACCTAACGGGGGTGGAAAGAGTAATGTGATTGATGCGATGTTGTTTGTGTTCGGGAAGAGAGCGAAGCAGATGAG GCTGAATAAAGTTTCTGAGCTTATTCACAATTCCACCAATCATCAGAATTTGGACAGTGCTGGTGTTTCCGTTCATTTCCAGGAGATTGTTGATTTGGAA GATGGAACATATGAGGCTGTTCCAGGGAGTGATTTTGTGATTACCAGGGTGGCTTTCCGGGATAACTCATCTAAGTATTACATTAATGATCGTTCGAGTA ACTTTACTGAAGTTACCAAGAAACTGAAAGGGAAAGGTGTTGACCTTGATAATAACAGGTTTCTGATCCTTCAGGGTGAAGTTGAGCAGATTTCACTCAT GAAGCCAAAATCTCAAGGACCTCATGATGAAGGTTTTTTAGAATATCTGGAGGACATCATCGGTACTGACAAATATGTTGAAACAATTGATGAATCAAAT AAGCAGTTAGAATCCCTGAATGAGAGAAGATCTGGGGTTGTGCAAATGGTTAAGCTATCTGAGAAAGAAAGGGACAACTTGGAGGATGTAAAGAATGAAG CAGAAGCATTCATGTTGAAAGAGTTATCTCTTTTAAAATGGCAAGAGAAAGCTACAAAGTTGGCTGTTGATGATACAGATGGAAAAATGGTTGAGTTACA AGAGAATGTTTCTACCCTAGAAGAAAATCTGAAGGCTGAAAGGGATAAAATTAAAGAAAGTAAACAAACTCTGAAGGAGCTTGAAACTAAGCACAACAAC TACATGAAAAGACAAGAGGAGCTAGATAATGACATGAGGAAGTGTAAGGAAGAGTTCAAGGAGTTTGAGAGGCAGGATGTCAAGCATCAGGAAGATTATA AACATTTGACTCAGAAGATCAAGAAGCTGGAGGACAAAGTTGAAAAGGATTCAAAAAAACTTGAAGCCCTTGTAAAGGAGGGTGAGGACTCAACTGATCT AATACCGAAACTTGAGGATGATATCCCAAAACTGCAGAAATTATTGATCGAAGAGGAGAGGTTGTTAGAAGAAATCATTGAGACGTCCAAAGTCGAAACT GAAAAATACCGCTCTGAGCTTTCTAGAGTCCGTGCTGAGCTTGAACCTTGGGAAAAACAATTGATCGAGCACAAGGGAAAACTTGATGTTTCATCTAATG AGAATAAGCTTCTAAATGAAAAGCATGAAGCTGCTTGTGAAGCTTTTAAAGATGCTCAAAAGCAGATGAAAAGCATATCAGAAACAATCAAATCAAAAAC CGCCAGCATTTCTCAAATTAAGAGTGACATTGAAAAGAGCAAGTCCGAAGCATCAAAAGCTCACCAAGTGGAAAAAGACTGTATCATAGAACAAGATGAA CTCATTCCTCTTGAACAAGGTGCTAGACAGAAGGTTGCAGAGCTGAAATCTGTTCTAGATTCTGAGAAGAGTCATGGATCAGTTCTAAAAGCGATCTTGA AAGCTAAGGAAACCAAACAGATAGAAGGAATATATGGCCGTATGGGTGATTTAGGTGCTATTGATGCAAAGTACGATGTTGCGATTTCAACAGCATGTTC TGGACTTGATTATATTGTGGTTGAAACAACAAATGCAGCACAAGCCTGCGTTGAGCTACTTCGTAGAGAGAATCTTGGTGTTGCTACTTTCATGATATTG GAGAAGCAAGTTGATCTTCTTCCAATGTTGAAAAAAAAAGTAAGCCCTCCAGAGGGGGGTCCACGTCTTTTTGATTTAGTTAAAGTTCAAGATGAAAGAA TGAAGCTTGCTTTCCTTGCTGCACTTAGAAACACAGTTGTCGCTAAGGATCTTGACCAGGTCAGTTATGCTTTTGTAGCGGAATACTCTATTTTGATAAT AAATATCCAGGGCCATTAATCATTATACTGTAATTACCAGTTACTCGCAATGATATAAAATATATAGCTTAGGTTTTAGACAGCACATTTTTAACTTTTC ATATCAGTGAAGGAGACCACTGAATACCAACCTTTTTTTCTACCTCCGCCATATTTTAGGCCACACATATAGCATATGGTGGAAACAATGAATTTGGACG TGTTTTTTACTCTTGATGATGCACTCTTTGAAAAATCTGGAAAGATGAGTGGTGGGGGTGGTAAGCCCCATGATGGGAAGAGGGGGACATCTATTCGGCA ATAATCCCATCCTTGGTCCTCAGTTAGGTGATGAATGTTAAATCTCTTTCTGTTGATCTGAAGATAATTCTTCAGAGACATACAGAAATATTCATCATCA TGAACTTATCAGGAGGAGGAAGAAGCTATCGAGAGAAGAAAGAAATATTAGGGTTTGTAATGTGAGCGAAGCCAGAGACTGTGTGAAGAACCCTACATTT GTATATAGACATACACATATATTTGACATCACGTTCTGCCTTGCACGGGAGTAATAATGTTTGTTTTAATAGAGCATTGCAACCGGAGTAATAGTTTGTT TTAGTAGAGTAAAGAAAATAATTAAATCCATTATGGTGGCCTGAGATCTATCTTTTGTCTGCCCATGTCTAGTACCCTTTAATTTTTTATTTAGCTAAAA AGCATTCCATCCCATGGCATGGTTTCTTTGTTTGATATGGTAGAGTTGAATCTTGAAATCAAGTTAACATTGCAATGCAATTCCTTCTCTCATGGTTTGG ACTGGAGGTAATGTCTAATCCAATTGTGCAACCATAAAATCACCTTTCTTATATTAATTAATGCAGTTCAATTATAAAATTTGCTGAGCAATGCCTAAAT CCAGAAATGAGAGCATCAATTTTTAGTCCTCGGCTTATGGAATTGATGCATTGCATTTTATTCATTTCCATCTTGCACAATTTTAATTTAGCTTCTCTAC CTCTGACCATCAGGGGCTGGGAAAGCATATGCATGCAGTAGCTATGGCTACCACAAAAGTTATTAAAAGTGAATTTTTCACGAGTAATTTTTTATGATTT TTTATGACTTCCCCCTTGAATAAAGTATCATTCTTGGTTTCCTTATTGAAAATGTTCTATCTCTGTCCTAGCCTTCATATTTATTTCAAATGCCTTTCTT TTAGACATTAAATTTAGATGTGTTGTTTTTGCGGCCTTCTGGATTTATTTAAGTAGTACTGTGTGTCCTCGGAAGATGGATGTTCTAAAAGTTAATGCAT TTATAGCTTTATTATTCTAATTATCTACTGCACCATTTTGGCTATACTTTTAGTCAAGTAACTTGCATTTTATTATAAATAAAACTAAGCTGGAATTGCA CTTGGCCTTATTTGGTTGTGTATGACAATATAAATAAAAGTGATTTAAAATGTGCTTTTATTTGAAGGTGTGAGATTAGGATTCCTATTATATTTTAACA ATTTTGGATTTATTTTTAAATCATGTCTCTGTACATGGTTGTCTACCTAGGTTTCACATGTATTACTAACGTAATGTACACAAAACTCAGACTTTTACTA TTGTAGTCATTATTTGCATATTCACTTGGAAATTAATAGGAACTGAACTACTATCATTCTGGAAGATTTATGTTTGGATCTCTCTCTTTTTTTAACAATT CATGACTACCTTGTTCCTCTTAGTGCTAATTGCATTTGCTCAATTAATATTGAAATTCATTGTAGTATATTAGTTGGTTGAATACCACAATATAATTTAA TAACAATGAATGTAGTGTTGTTATGGAGGAGCAATTCATACTTAGAGTTCCACCAAGTGTTGCAGAGCGAATAGAGCGTCTTCTTAACAACAACAACATT AATAATAGTGATGCTCCATCTTCTTCATCTGAGGACAACAAGTCATTAGATTTGTCTTTTAGTGAGGATGGCAGAAGTGGTTCCTTCTTGATTGGCAATG AACGATTCCCAGCATCTCTCTTGGACCTTCCTTGTGTCGTTGAATCGTTTAAAACTTATGATGATAGTTCTTTGATTAAAACAGCTGATATTGCTCAGAT GATTATGGTGAGGGAATCTGGGGATCCTGCTCCAGATGTCATTGAGTACAGACATGGCCTTACCCCTCCCATGAGAGATGCTCGAAAGCGTAGATTTCGC AGAGAGCCGGATCTCAATCCTGAGCTTGTCTCCCGTGTTGAGAAAGATCTTCTCAAAATCATGGCTAGAGGAAATGTCGACAATCTTGATGTGGAAGTAG CTGATCAAGAAGAAGGGGATGAGAATGTTCGAGGTGCTGCTGAGAAACCTGCACCTGCACCAGTCCCAAAACATGATGTTCGGGTGACTCGTACAAATGC TGTGGAGCAAGATAGGAGTGACTCTGATGAATCCGATGACTCAGTTTGAATGAAATATGCACAAAGAATACTTATATTGCTATGTTGAAAGTCTACAAGA ATATGCATAAAGTATATTTGGCTTTTAGAATCACATCCACCATCTTATAGTCTGCTACATGGATTTCAATTGCAATTTAACATTGCATTTCATTTGTCGA TTGATTAGTTGCATTTTACACCGGCTATGATCATTGAGGTCCTTATTTTCATTTGCATATATGAGAACGTGGGTAAGAATGTACTTGAAGCCAATTTTGC TTCCATTTATAACCCCTTCTTCTTTATCAGCTATATGCTTAAAAACCATTTTTTTTGACCTTTTCACATGTATGACGTAATTTTATCTTAGGCAAAGCAA CAATTACTTCATTTTTAATCAATTTATTCGAACGATCCGTG BLAST
Tissueflowers
Gene nameLI_gene_66718; 
Additional informationdetails; 

Expression of Ll_transcript_54039

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_54039
BlastpStructural maintenance of chromosomes protein 4 from Arabidopsis with 73.93% of identity
BlastxStructural maintenance of chromosomes protein 4 from Arabidopsis with 73.93% of identity
EggnogRequired for chromosome condensation and partitioning (By similarity)(COG1196)
KeggLink to kegg annotations (AT5G48600)
CantataDBLink to cantataDB annotations (CNT0001234)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432441.1)
PfamRecF/RecN/SMC N terminal domain (PF02463.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;