| Id Trinity | FTRINITY_DN57206_c1_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_54036 |
| Sequence | CGAAGACACAATTAATCTATTAGAAACATTTGTGATGAACATTAAATATCTATTTTAAAAATCATGTAATAAATAGTAAATATTAAACAAACATAAATTA TTATTTCAGTTGTTATACATAACATATGGGGCATTCATAAGAAAACATAATTTTATCAGAAACGAGGAGAAAATGAGGGAAGAGAATAAAGAAAATTTTG AGGATAAAAATGAAGGACATTATAGTCATTTGAATAAATTTCTTCTTTCCTTCCTTTTCCACCCACATTTGGGAAGAAAACTTTTAAGCATGGGGCCCAC CACTTTTTTCCATCCGCCCATTTTCCCTTGTCAACCAAACAAGGGAAAAGTGACTTTTCCTTCTTTTTTCCTTCCACCCCTTTTCTTTCCTCCCATTTTC CACAAAATCAAACATAAGCTTAATGATAGCTAAGTAATTTTTTTACTTTGATACTTCAGGCCCTTTGGTACTCTTACCTTTTTGTCAATGTTGATGTCTG AGGTAATGAAAGTCCTCATGACTACTATCATAGACGAGGAGACTTGGAGCTGGGAAGCACGTGATGTCTTACTGGATACTTGGACTTCCCTTTTAATGCC AATAAATACTATCACGGCAGATGCTTTGCTTCCACCTGAAGGGATAAAAGCTGCAGCAAATCTCTTTGGGTTCATTGTAGAATACGAGCTAAGAATTGCT TCAGCATCAGCATTTAATGATGAGAGCGATGCAGACTATCTTCATGCTTCTGTGTCTGCCATGGATGAAAGGTTAAGCTCGTATGCTCTTATTGCGAGAG CTTCTGCTGATGCTACAATTCCTATGCTCATGAGAGTGTTTTCTGAGCGGGTTGAACGCCTTAATCAGGGCAGGGGCATTGTTGACTTGACTGAAACTTT GGAAGAGCTTTATTCCTTGTTGCTGATTATTGGCCATGTACTTGCAGATGAAGGAGAGGGGGAACTACCACTGGTTCCCAATGCCATACAAACCCAATTT GTTGTTAATGCTGCAGAAGCAGATATACATCCTGTTGTTTTACTTTCCAGTTCAATCATAAAATTTGCTGAGCAATGCTTAAATCCAGAAATGAGAGCAT CAATTTTTAGTCCTCGACTTATGGAGTCAATTATATGGTTCCTGGCAAGGTGGTCTCGTACATATCTAATGTCGTCAGATGGAATTGGGGACAAAATCTT AGATTCAAGTCATCATCTCGAGCATAATTCAAAAAAGGCTTTGCTTGGTTTCTTTGGAGAGCATAACCAAGGGAAACTTGTCCTGGATATTATTGTTCGT GTATCCTTGGTCTCACTTAAATCATATCCAGGGGAAAAGGATCTGAAGGGCGTCACTTGTCACCAGTTACTTCATTCGCTGGTTCAGCAAAAGCATATAT GCGTTCACCTTGTTACTCTGAATTCATGGCATGAACTAGCAACTGCGTTTTGCACAGAACAGGCTTTATTGTTGTTGGACACTGCTCATCAGCGGTCACT TGCACAAACACTTGTTCGTTCAGCTTCAGGCATAAGAAACTCAGAAGCATCAAGCCAGTATGTAAGGAATCTCATGGGTCACATTGCAACATATATAGTG GAGATGTCAAGCAAGAGTAATTTTAAAAGTATTGCACAACAACCAGATATCCTCCAATTGGTCATCTGCATGTTAGAACGACTACGCGGAGCTGCAAGTG CTTCTGATCCTAGAACACAGAAGGCTATATATGAGCTAGGGTTCTCTGTAATGAACCCCACACTTGTTCTTCTTGAAGTATATAAACATGAGTCTGCAGT CATCTACGTGCTGCTTAAATTTGTACTTGATTGGGTTGATGGACAAATTACTCACTTGGAGGCCAAAGAAACTGCTGCTGTTGTTGATTTCTGCATGCGT CTGCTTCAAATGTACTCATCACACAATATTGGCAAGATATCACTAAGTCTGTCCAGCAGCTTACTTAATGAGGAGAAAACAGATAAGTATAAAGATTTGC GTGCTCTTCTTCAGCTTCTTTCAAGCCTTTGCTCTAAAGACATGATTGATTTCTCGTCAGATTCAATTGAGACCCAGGGCACTAACATATCTCAGGTGGT TTATTTTGGTCTTCACATAGTCACACCACTGATTTCCATTGAGCTCTTGAAATATCCCAAACTTTGTCACGATTATTTTTCTCTCCTGTCACATATGTTG GAGGTTTATCCAGAAACATTTGCACAACTCAGCAGTGAAGCCTTTGCTCATATACTCGGAACCCTTGATTTTGGTCTCCACCATCAGGATGAAGATGTGG TTACTAAGTGTCTAAGAGCTCTGCAAGCTCTTGCTTCTTACCATTACAAGGAGACTCATAATGGTAATATAGGCTTGGGTGCACATGCCATGGGTCTTAA GGATTCAAGTGGGAATTTTCAGGAAGGCCTTTTGAGCCGGTTCCTTCGCTCATTGCTGCAGTTACTCCTTTTTGAGGATTACAGTTCTGATCTAACCAGT GTTGCAGCAGATGCTCTCCTTCCATTAATCCTTTGTGAGCAAGGCCTGTATCAGAGATTGGGCAATGAATTGATAGAGAGACAAGCAAATCCAACACTCA AATCAAGGCTGGCAAATGCATTGCACACACTAACAAGTGCAAATCAGCTTTCTTCTTCCCTCAATCGAATAAATTACCAGAGATTTCGGAAAAATCTTAG CAGCTTCCTAGTCGAAGTTCGTGGCTTTCTGAGGACAAAGTGATCGACCAAACCATGTAGGCCATCAGTTTTGTATAGCGTCAAAAGAAGAGTTGATATC ACTAATCAATACTGCAGCCATAGAAGAAAATGTTATTGAATAGATAATCTCTTGGCAGAAGAAATTTTTGGAGTTACAGAAATATCCAATGCTATCTACA CTGGGTATTCTTGTTACTCAGATCTCTAGTGCTGTTTCCAAAACTAGAAGCTTCTTCTTTATTAGTCACAGGCTTTCCGAAAAGCATAAAACCTATAATC TGAAGGTATGAGATGCAGTTCAGTGAGAATGATCTTGATATCAAATTTCTCTGGTGAACTGCGTTGTTGTATTGATATGTCACTAATTCACTATCATTTT TGTTGACAAGCACAAAATCTGTTCAGATCTATTAAGAGCTGTTAAACCATTCCCGAGTTTCTGTGTTCTTGAACTTTTTGAAAACTTTATTCTTGACCAC ATCAAAATGCCAAATGAGCAAGTTTTATTCACTGGTTTAGCAATTGCAGTTGTAATGAGTACATGTGACTCCATCTTACTGTGGTGTTTGTGTAAGAAAC GAGATCTTGATTTGTGACGGATGGCGAGAGGTTATGAGTTCATATTCTAGAAATAATTTCTGTTTGAGGGTAAGATTGGTAAATCTACCATCTTCGGAGT CCATTAAGTGAGAAATTCTTGTATTGAAATGATGGCATGGGGCAAAATGTCTAATCCTTACATAATGTCACAAAATAGAAGTAGACACATTTGTTATTCA TTCATGTAACGCTAATGTTTGTGCAAATATATGGAAATTAATGTGTAAAAATTTATACACTGACAGTGTAAAAATTTATACACATGCACATCATCATCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66719; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_54036
| Blastp | Exportin-4 from Xenopus with 26.16% of identity |
|---|---|
| Blastx | Exportin-4 from Xenopus with 26.02% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (734704) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418952.1) |
| Pfam | CRM1 C terminal (PF08767.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |