Ll_transcript_54056

• Id Trinity: FTRINITY_DN57206_c1_g2_i7
• Name Transcript: Ll_transcript_54056
• Sequence: TCAAATTCTGAATTGGGATTTTCGTTGCAATACCAATGACACAAAAATAAATGCTGCAAATGTCTTCTCTGCTGGAGTTAGGCCAGATGGGGATTCGATT AAAAGGTCTGAATGTCACCTAGTGCAGCCTGGTTCGGATTGGCGTGATGTGTTGATAATAAGTGGTCAAGTTGAATGGCTTTTGAATCTATATGCAGCAT TGAGGCAGAAATTTTCATGTGAAGGCTACTGGCTTGACTGCCCTATTGCAGTTGCTACTCGAAAGCTAATTGTCCAATTTTGTTCTGTAACAGGAACTGT ATTTCTTTCTGATGATGGGAAAATGCATGAGCGGCATCTTCTGCAACTCTTATCTGGGATAGTAGAGTGGGTAGATCCTCCTGATGCAGTTTCACAAGCT ATTCAATGTGGGAAAAGTGAAAGTGAGATGATTGATGGTTGCCGTGCTTTATTGGCTGTTGCAACTGTAACAACTCCCTGCGTGTTTAATGATATCCTAA AATCTATAAGGCCCTTTGGTACTCTTACCTTTTTGTCAATGTTGATGTCTGAGGTAATGAAAGTCCTCATGACTACTATCATAGACGAGGAGACTTGGAG CTGGGAAGCACGTGATGTCTTACTGGATACTTGGACTTCCCTTTTAATGCCAATAAATACTATCACGGCAGATGCTTTGCTTCCACCTGAAGGGATAAAA GCTGCAGCAAATCTCTTTGGGTTCATTGTAGAATACGAGCTAAGAATTGCTTCAGCATCAGCATTTAATGATGAGAGCGATGCAGACTATCTTCATGCTT CTGTGTCTGCCATGGATGAAAGGTTAAGCTCGTATGCTCTTATTGCGAGAGCTTCTGCTGATGCTACAATTCCTATGCTCATGAGAGTGTTTTCTGAGCG GGTTGAACGCCTTAATCAGGGCAGGGGCATTGTTGACTTGACTGAAACTTTGGAAGAGCTTTATTCCTTGTTGCTGATTATTGGCCATGTACTTGCAGAT GAAGGAGAGGGGGAACTACCACTGGTTCCCAATGCCATACAAACCCAATTTGTTGTTAATGCTGCAGAAGCAGATATACATCCTGTTGTTTTACTTTCCA GTTCAATCATAAAATTTGCTGAGCAATGCTTAAATCCAGAAATGAGAGCATCAATTTTTAGTCCTCGACTTATGGAGTCAATTATATGGTTCCTGGCAAG GTGGTCTCGTACATATCTAATGTCGTCAGATGGAATTGGGGACAAAATCTTAGATTCAAGTCATCATCTCGAGCATAATTCAAAAAAGGCTTTGCTTGGT TTCTTTGGAGAGCATAACCAAGGGAAACTTGTCCTGGATATTATTGTTCGTGTATCCTTGGTCTCACTTAAATCATATCCAGGGGAAAAGGATCTGAAGG GCGTCACTTGTCACCAGTTACTTCATTCGCTGGTTCAGCAAAAGCATATATGCGTTCACCTTGTTACTCTGAATTCATGGCATGAACTAGCAACTGCGTT TTGCACAGAACAGGCTTTATTGTTGTTGGACACTGCTCATCAGCGGTCACTTGCACAAACACTTGTTCGTTCAGCTTCAGGCATAAGAAACTCAGAAGCA TCAAGCCAGTATGTAAGGAATCTCATGGGTCACATTGCAACATATATAGTGGAGATGTCAAGCAAGAGTAATTTTAAAAGTATTGCACAACAACCAGATA TCCTCCAATTGGTCATCTGCATGTTAGAACGACTACGCGGAGCTGCAAGTGCTTCTGATCCTAGAACACAGAAGGCTATATATGAGCTAGGGTTCTCTGT AATGAACCCCACACTTGTTCTTCTTGAAGTATATAAACATGAGTCTGCAGTCATCTACGTGCTGCTTAAATTTGTACTTGATTGGGTTGATGGACAAATT ACTCACTTGGAGGCCAAAGAAACTGCTGCTGTTGTTGATTTCTGCATGCGTCTGCTTCAAATGTACTCATCACACAATATTGGCAAGATATCACTAAGTC TGTCCAGCAGCTTACTTAATGAGGAGAAAACAGATAAGTATAAAGATTTGCGTGCTCTTCTTCAGCTTCTTTCAAGCCTTTGCTCTAAAGACATGATTGA TTTCTCGTCAGATTCAATTGAGACCCAGGGCACTAACATATCTCAGGTGGTTTATTTTGGTCTTCACATAGTCACACCACTGATTTCCATTGAGCTCTTG AAATATCCCAAACTTTGTCACGATTATTTTTCTCTCCTGTCACATATGTTGGAGGTTTATCCAGAAACATTTGCACAACTCAGCAGTGAAGCCTTTGCTC ATATACTCGGAACCCTTGATTTTGGTCTCCACCATCAGGATGAAGATGTGGTTACTAAGTGTCTAAGAGCTCTGCAAGCTCTTGCTTCTTACCATTACAA GGAGACTCATAATGGTAATATAGGCTTGGGTGCACATGCCATGGGTCTTAAGGATTCAAGTGGGAATTTTCAGGAAGGCCTTTTGAGCCGGTTCCTTCGC TCATTGCTGCAGTTACTCCTTTTTGAGGATTACAGTTCTGATCTAACCAGTGTTGCAGCAGATGCTCTCCTTCCATTAATCCTTTGTGAGCAAGGCCTGT ATCAGAGATTGGGCAATGAATTGATAGAGAGACAAGCAAATCCAACACTCAAATCAAGGCTGGCAAATGCATTGCACACACTAACAAGTGCAAATCAGCT TTCTTCTTCCCTCAATCGAATAAATTACCAGAGATTTCGGAAAAATCTTAGCAGCTTCCTAGTCGAAGTTCGTGGCTTTCTGAGGACAAAGTGATCGACC AAACCATGTAGGCCATCAGTTTTGTATAGCGTCAAAAGAAGAGTTGATATCACTAATCAATACTGCAGCCATAGAAGAAAATGTTATTGAATAGATAATC TCTTGGCAGAAGAAATTTTTGGAGTTACAGAAATATCCAATGCTATCTACACTGGGTATTCTTGTTACTCAGATCTCTAGTGCTGTTTCCAAAACTAGAA GCTTCTTCTTTATTAGTCACAGGCTTTCCGAAAAGCATAAAACCTATAATCTGAAGGTATGAGATGCAGTTCAGTGAGAATGATCTTGATATCAAATTTC TCTGGTGAACTGCGTTGTTGTATTGATATGTCACTAATTCACTATCATTTTTGTTGACAAGCACAAAATCTGTTCAGATCTATTAAGAGCTGTTAAACCA TTCCCGAGTTTCTGTGTTCTTGAACTTTTTGAAAACTTTATTCTTGACCACATCAAAATGCCAAATGAGCAAGTTTTATTCACTGGTTTAGCAATTGCAG TTGTAATGAGTACATGTGACTCCATCTTACTGTGGTGTTTGTGTAAGAAACGAGATCTTGATTTGTGACGGATGGCGAGAGGTTATGAGTTCATATTCTA GAAATAATTTCTGTTTGAGGGTAAGATTGGTAAATCTACCATCTTCGGAGTCCATTAAGTGAGAAATTCTTGTATTGAAATGATGGCATGGGGCAAAATG TCTAATCCTTACATAATGTCACAAAATAGAAGTAGACACATTTGTTATTCATTCATGTAACGCTAATGTTTGTGCAAATATATGGAAATTAATGTGTAAA AATTTATACACTGACAGTGTAAAAATTTATACACATGCACATCATCATCC
• Tissue: flowers
• Gene name: LI_gene_66719;
• Additional information: details;

Expression of Ll_transcript_54056

FPKM

• FPAB: 2.7
• FPNAB: 6
• LF1: 5.5
• LF2: 3.1
• LF3: 3.5
• LF4: 4.7
• UF1: 5.1
• UF2: 3.7
• UF3: 3.3
• UF4: 3.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_54056

• Blastp: Exportin-4 from Xenopus with 23.7% of identity
• Blastx: Exportin-4 from Mus with 23.36% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (734704)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418950.1)
• Pfam: CRM1 C terminal (PF08767.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;