Id Trinity | FTRINITY_DN57211_c0_g1_i7 |
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Name Transcript | Ll_transcript_53344 |
Sequence | TAATAATATTGCATGAATCATTAAATCGGCCAATGTATTAGTATAAGGAGAGATTTGGGCCTTTGGCCCCGTCTATAATATTAAGTAAAAGTTGCGTTAA AGTTAAATTAGTTCAAAATCCAGTAATCCTTTGCATCTGCACTCATTCTCTAAATCTCACTCTTCCTTCGTTATCAGATCTTCGTTTCTCTTCAAAATCA CACCGCAATGGCCAATTCCTCCGCCACCGTCCCAGTCAGAAAGCCCATCACTCACGTCATTTTCGACATGGACGGTCTCTTGCTCGACACTGAGAATTTC TATACACAAGTTCAGGAAATTATACTTGCTAGATACAATAAAACCTTTGATTGGAACCTCAAGGCTAAGATGATGGGAAAGAAAGCAATAGAAGCTGCTA GGGTTTTTGTTGAAGATACTGGAATTAGTGATTCTCTTAGTGCTGAGCAGTTTCTAGTAGAAAGAGAAGAAATGTTGCGGGATTTGTTTCCATCAAGTGA TCTCATGCCAGGTGCTAGCCGGTTAATCAGGTATCTACATGCAAAAGGAGTTCCATTTGGCTTGGCAACTGGTTCTCATAGGCGACATTTTGAATTGAAA ACTCAAAAACATGGTGATATCTTTTCTTTAATGCATCATGTTGTTCTTGGTGATGACCCTGAAGTTAAACAAGGCAAACCATCACCGGACATATTTCTTG CTGCAGCCAAGAGATTTGAGGGTGGACCTGTAGATCCTAGTAACATTCTTGTTTTTGAAGATGCACCCTCGGGAGTTCTTGCTGCTAAAAATGCTGGGAT GTCTGTTGTTATGGTTCCTGATCCAAGGTTGGACAAATCTTTTCATGATACAGCGGACCAAGTTTTGAACTCACTGTTGGATTTCAACCCTAGTGAATGG GGTTTGCCTCCGTTTGAAGATAATAGAAGCTGAACTTTGGCCTTCATTACTGTCATACATTTTTTATTGCAGACAAAGAAGGTTGCATATCTCTTGTACA ACTAAATCGATGAGAAATTAATCCATTTCATAGAATGTCAGTTCCATTGTTTGAACTACATTCTTGTTCCTTGTAATAATATTATTACAGCAATAAGTAT CAGGTTGTCACCTTAGCTGATATATTGTTTACATGTTTCTCTAGTGGGTTGAAACATGATTGGATTTAATTTTTTACCAATATATCAAGTGCTCTTCTTT CAAAAGAAGAGAACAATGGGTCCACATTAAAAATAATATTATAGGTAGGAAACATAAAAAATATATCATCATGATATTGTACTTGGGAAATATCAAAAGT ATGTTTTCAGACTCAATTTTTTTCCACAAGATTAATAATCATCATGTTTAACATTTTCTTCATACTCTTTCAACTTTATTCTTGATGTGTGATGAGGTGA GGTTTCAACAATGTTTAAG BLAST |
Tissue | flowers |
Gene name | LI_gene_66770; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_53344
Blastp | (DL)-glycerol-3-phosphatase 2 from Arabidopsis with 74.48% of identity |
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Blastx | (DL)-glycerol-3-phosphatase 2 from Arabidopsis with 74.48% of identity |
Eggnog | HAD-superfamily hydrolase subfamily IA variant 3(COG0637) |
Kegg | Link to kegg annotations (AT5G57440) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442307.1) |
Pfam | haloacid dehalogenase-like hydrolase (PF00702.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |