Ll_transcript_54308

• Id Trinity: FTRINITY_DN57226_c3_g1_i16
• Name Transcript: Ll_transcript_54308
• Sequence: AAATAAGATAAAAGAAAATTGATTTTGCATAGTGCACAATTGAGTCAGACACCACACACACCTTTTCTCATCGGCGTCAGTGGCGGCGGAACCCTAACCT CCGCCAAGATAACTAGCATCGATTACTGCGGCTAGAGAGGAAAAGTAATAATAATGGCAGCAGTGGAGGAGAGAGAAGTTGCTCCTAAAGCAGGAGGAGA AGAAGAGGAACAGATAGTGAATCCGTGGGAAGTGTCGGCCAAAGATGGAGGCAAAATTGATTATGACAAGCTCATTGACCGATTTGGCTGCCAAAGGCTT GATCAGTCTCTGGTTGAAAGGGTTGAGCGCCTCACTTCCCGTCCGGCTCATGTCTTCCTCCGCCGTGGCGTGTTTTTTGCTCACCGCGATTTCAATGACA TTTTGGATGCATATGAACGAGGCGATAAGTTTTACTTATATACTGGACGAGGGCCATCTTCAGAAGCTTTGCATTTAGGGCATTTGATCCCATTCATGTT TACTAAGTACTTGCAAGATGCATTTAAGGTTCCACTGGTTATACAACTTACTGATGATGAGAAGTTCTTGTGGAAAAACCTCACCATTGAGGAAAGCCGA AGACTAGCTAGAGAAAACGCAAAAGACATCATTGCCTGTGGTTTTGACGTTTCTAAAACATTTATCTTTTCGGATTTTGATTATGTTGGCGGTGCCTTCT ACCGGAATATGGTAAATGTTGCAAAGCGTGTGACCTATAATCAGGCTGTTGGCATTTTTGGTTTCACCGGTGAAGATCATATCGGAAAAGTTAGTTTTCC ACCAGTACAGGCAGTTCCATCATTTCCCAGTTCATTTCCTCATCTATTTTCAGGCAAAGAGAATCTCCGTTGTTTGATTCCTTGTGCAATCGACCAGGAT CCTTATTTTAGAATGACGCGAGATGTTGCTCCTCGGATAGGATATCACAAGCCTGCCTTGATTGAATCGTCATTTTTCCCGGCATTGCAGGGAGAGAATG GAAAAATGTCTGCCAGTGATCCCAATTCTGCAATATACGTGACTGATTCTGCAAAAGAAATTAAGACTAAGGTAAACAGGTATGCATTCTCTGGTGGGCA AGATTCTGTAGAGAAACATCGGCAATTAGGGGCAAATCTTGAGGTAGATATCCCGATCAAATACCTTTCTTTTTTCCTGGACGATGATGTTGAACTTGAA CACATTAAGAAGGAATATGGAGCTGGACGCATGCTAACTGGTGAGGTGAAGCAGCGCCTAGTCGAAGTCTTGACAGAGCTAGTGGAGAGACATCGTAGGG CTCGGGCTTCTGTGACTGATGAG
• Tissue: flowers
• Gene name: LI_gene_66898;
• Additional information: details;

Expression of Ll_transcript_54308

FPKM

• FPAB: 28.7
• FPNAB: 40.2
• LF1: 24.8
• LF2: 20.5
• LF3: 22.8
• LF4: 32.7
• UF1: 24.8
• UF2: 22.6
• UF3: 26
• UF4: 28.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_54308

• Blastp: Tryptophan--tRNA ligase, cytoplasmic from Arabidopsis with 86.97% of identity
• Blastx: Tryptophan--tRNA ligase, cytoplasmic from Arabidopsis with 86.97% of identity
• Eggnog: tryptophanyltRNA synthetase(COG0180)
• Kegg: Link to kegg annotations (AT3G04600)
• CantataDB: Link to cantataDB annotations (CNT0001612)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462109.1)
• Pfam: tRNA synthetases class I (W and Y) (PF00579.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;