| Id Trinity | FTRINITY_DN57228_c1_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_52677 |
| Sequence | CGTTAGCACATGGTTGAGTGTTTCTGGTGCATGTAAATGGTCAATTTGGTTGCTTTAGTTAAGCTTATAACCAAATATTGTTTTTTCATTTTGATCTATT TCTAATTATAACAGTTTTTCTCTGATTCGTGGAAATATAACCCACAAAGGATATGCTGCTGGTCCCTGTAGTAGTCAATTTGATTAACTAAAACAATTAA GTGATACTCAACAGTTGGTAATAGCAATTGCAACCTCATTAACTTAAAAGCTACCCTATTGAATGCTGCTGATAAATCAGTGTGATCTTGGTTATCGACA CAGAAATCAACAAAAGTTTGTTGCCTGCCACATAATTCTTTACAGCAGTAGAAGATCCTAGTTCCTTCTAATTTGATGTGGGTTATCTGTGTGGAGTGTG TATGCAACTTATAGCGAAAACTGAATTCTAGTCTCTTGTATACTTTTAAGTGCTATTTCGATTTACGTCTCCACTGACATTTGGTTTTATGAATTCCTTG TGGGAAAACATAGGACCTGGTATACTTCAATAAATTGGCTTCACAGTGATTGTGAAACTATCATGTGTCACCCTTTATTTTTTGGGCTTCATATGTTGTG ATGAGCTTATATGGGATGTCTGCTGAACTTCCTGTGAGATCTTTGTATTATTTTTTTGGATGAGATATTTTGCTCCATCCAAGTTTTGATGCTTTATGAA AACTTGTATCAATATAATTTTGATTGATATTTAGCCTTTTATTAATTGTCTCCTTTCCTCTCCTAAGTAGCTGTTACAAAGTACATAAGAAGAACCAAAT CTCATTTGTTTGATGAGTAATGATTATGAGAGATACAACTTTACTGCCACCAAACTGTTTGTATACACCTAAGTAACTTTTATCCAAAAAAGAAAGTCAA TATAGGATTGCATACTTTAACCACATGCTTTCTTGCTTTATACTGTTCTGTTAAATGACTTGTTTTCATGTGTATATATAATGCCATCTATTGTAGGAAA GTGGGTATAATTTGAATTGAACAGGAATAAAAACCTTTTTTGTACAGGTTGTTGTTTCATAAAGTATGCTACGTCTGAAGATGCTGACCAGGCAATTAGA GCATTGCACAATCAACATACTCTTCCTGGAGGTATTGGTCCAATCCAAGTGCGGTATGCTGATGGTGAACGGGAACGCCTCGGTGCAGTAGAGTACAAAT TATTTGTGGGCTCTCTGAACAAACAGGCTACTGTAAAGGAAGTTGAGGAAATATTCTCAAAATATGGTCGTGTAGAAGATGTTTATCTTATGCGTGATGA GAGGAAACAAAGCCGTGGTTGTGGTTTTGTCAAATACTTGCATCGAGATATGGCACTGGCTGCTATAAATGCACTTAATGGAATCTATACAATGAGAGGT TGTGATCAACCACTAATTGTCCGGTTTGCTGATCCTAAAAGACCTCGTCAAGGAGATTCCAGGGGTCCTGCATTTGGAGCTCCAGGATCAGGTCCTAAAT TTGACCCACCAGGCACAAGATTTCCACCCAATACTAGTGTTCCTATGGGTGATCACATGCCTCCCCCGAATGCATGGCGTCCAATGCATCCACCAAATAT GGGACCATCCTCTAATGCTGATCTCCATGGTATGGGGCCTCCATGGCGTCCAAGATCTGGTGACACTGTATTGCCAATAAACGCAGGTGGTCCTATGACT GGCATGGGAGGCCCCATAGATGGCCGCTTTCAGGTTGAATCCCAGTCATCAATGTCACAACAGAATTTCAACCAATCTGTGCCGCAAATTTCACCAGTCA ACCAACAAATATCACCATTGCAAAAACATTCCCAGTCATCTCAGGAGTTGCCACCTGTTCACCAGTTGTACCCTCAAGCACCAATGCCCTACTCCCAAAC GTCATCACAATCTTCTCTTAGGCTGGTTGGCCAGCCACAACTTCCTTCCTCTGCTGGTCAGCATGTACATGGCACAAGTGGACAATTCCCAACTTCTTAT CCTCAAACTCAGCAGAGTGCCTTGCCTGCTTCGAATCCTCGGATACCTCATGATAGCAGCTTCCAACCCAATGCAGCATTTACCACTCCTAATCAACAGC AAGTTCCTTCGTCTGTGCCGCTTCAGCCATTTCAGCCTCTTCAGCAGTCCCCTTCTCAGTTAGCTCAGATGTTGTCACAACAAAAACAGACTTTACAAGC AAGTCTTCATTCTTCCCAGCAGGCATTCTCCCAGCTTCAACAACAAGTACAGATGATGCAACCATCTAGTCAAACATCAACAATGCAGCAAAATGCAGCA ACGGCTAACCAGCAGCAGGTTCAATGGGCCGGGGCTGTACCACAAGTCAGCAATCCTGCAGCTGCACACATTGGAGATGTGCCTTCATCCACATCTGCTA CTACTGCCGCAGCAGGGATAGGCCAGAACATAGCTCTTGCTAAATGTGATTGGACAGAGCATTTATCTCCCGAGGGCTTCAAGTACTACTACAATAGTGT GACTGGTGAAAGTCGGTGGGAGAAACCGGAGGAGTTGACATTATCTGAACAGCAAAAGCAACAGCAAAGGCTACCTAGTCAGCACTCACAAACTCAGTCA CAATCTTCAATGATATCTTCCCAGCAAGTTCCACAAATGCAACAGGCTCAGGCTCAAGCTCAAGCTCAGGCTCAAGCTCAGGCTCAAGCTCAGGCTCAAG CTCAGGCTCAGGCTCAAGCTCAGGCTCAAGCTCAGGCTCAGAGTCACTTCCAAGGACAGATTCTCCAGCAGCAACAAATGCAGCAGCCTTCTTTGTCTTC TTCGGCATATGGAGTCACAGGTCATCAAAATGTTCAGGACGTTGGTTATAAACAGTTTCAGGCATCAGCTGTTTCTGCTGGTGATCCTGGACACTACTCA CAGGGTATTCATACTACACAAGACTGGATGTGGAAAAACAAGCCTGCAGGTTACCTTGCGTCCACTCATCTACTCCCTCCCTGAATATGCACACCGCCTA AACTACATGCTTAGTTTACTACCTTGATCTCAGATGGTGTAAAACTTTAAAAAGTTAACAAAAATAAATAAACAATCTCTTAATTAATGCTTTGCCTACC GTACAGGTCAATAATTTAATGTGTTTCATCACCGGACTGTTTTTTTGTCACATTTTACCAGCTTTTTGGGATAGTGGTAGTAGTAAATGTTGGACGGGGA TAGTGTTGCAGTCATCTTGATATTGTTCCTTTTGGGAGGAAGTAATGGATATTTCATCAGAGGGAAGATAATGAAAAACATTGTTATTTTGAATGGAGTA TATATGTCCTTTATTCATTTGAGGAGGTGGACCTGGGAATTGTCTTGGCTATGAATGTTGAATATGGGTGGTCAGGCTATGTTTCTTCTAATGTCTTCAC CATATCACTGCCCACATAACTGGTATCTTTTTTTCACCTGCAGGGAGTTGACGTTGCTGGGTTGAGCTTGAGGCTGCACATTGAAATGTTGCAGTTTTTA AATAGAACAGAATCTCAAATTTGATGATGGTCAAAGGTAGGGCATCATTTTCACCCAAAGTTATATGTAACAGTATTTGCATTCATGAGTTACTTGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_66923; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_52677
| Blastp | Flowering time control protein FCA from Arabidopsis with 43.79% of identity |
|---|---|
| Blastx | Flowering time control protein FCA from Arabidopsis with 49.71% of identity |
| Eggnog | CUGBP, Elav-like family member(ENOG410XNTW) |
| Kegg | Link to kegg annotations (AT4G16280) |
| CantataDB | Link to cantataDB annotations (CNT0000624) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463265.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |