| Id Trinity | FTRINITY_DN57245_c3_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_53001 |
| Sequence | TTCTTTTCTTTGTGTCATCTTCATTATATACCTTTTCACTAATAAACTAGATAAGCATAAATTAAAGAATAATGATATATGATATAAGTCTTGTAAATTA AATCCTTTCTTCCTCGAGCTAAACATTTTATCCATCGTCACGCGGCACGGTAGCGCGTGGGACCACAGATTCAGCAAATTCTCTCTCTATTCTACCATTG TTTCTCTCTCTAGACCTGGTCGCAGCACCACCATGACCCCACTTTCTTGAAAGAAAGAAAAATCAAAAATTGACACGATTCTTATATTATATATAAGAAT CGTAGCCACCACGGAATAATCAATCGTCGAAATCCAATGGGCGAGTTGACTCAGACAGAGTTGTACCCATCTAACTCGCCACGAACTCAGCAAGTGTGGA AATCAGTGTTGAGTTGGTTCGGTTTCTTCTTCCAAATATTCTTTCAGATTATCAGAGCCCTTAGTCACTACCCTTTACTCTCTTTCTCTTCTTCTAATTC TAATTCATCTTTCAAGCCCTTACCCTCAATTCAACTCCATCACCACCTTGATTCGCCGCCTGAAACCGCCGTCTCCGATCACTACCCTTCCCAGAAACTC CTGGTAGTACTTGATTTGGATGAAACACTAGTATGTGCATATGAGACATCAAGTCTACCAGCTGCACTGCGCACTCAAGCTATTGAAGCTGGTTTGAATT GGTTTGAGCTTGAATGTGTTTCTTCAGACAAGGAAGGAGAAGGGAAACCTAAAATCAATTATGTTACAGTCTTTGAACGTCCTGGGTTGAAAGAATTCAT AAGGCAACTTAGTGAATTTGCGGACTTGGTGCTATTTACGGCTGGTCTTGAAGGTTATGCTAGACCCCTTGTTGACAGAATAGACATAGAAAATCGGTTC AGTCTTCGACTTTATCGGCCTTCAACAACCAGCACGTAAGTGCTTCTGCCTCATTTAAGTCCCACTAATCTTTCTTGTCGCTCCTTTATTGCTAGTAGCC AGGCAACTAGTGTGAAATATTTTTTATAACTAATTTGATCTTTCTTTCTGGTGTTTTGTTCCTTGTTCTTTTGATACCAACCTATGTCTTCATGTTCTTT CCCTGTCTTCTTTACAGCCTTGAGTGGAGATCATTTTATCTTGGCAACAACGATAAAACACCTATAGATACTGCTATTTTCTCAATAATATGAAATTTGA CAAATATGAATACTTTATTACATTTTAAATTGTTTAGTTATCTATGTTTTTGAGCTTGAAGTTCAGAGTGGAGTCTTCCAAACGTAGCTGTACAAGTAGT CTTATTTATGCTGGATTCATGCAGGGAATATCGGGAACATGTCAAAGATCTTACCTACATCTCAAAGGATCTATGCCGCATTGTTATCGTAGATAACAAC CCCTTCAGCTTTTTATTGCAACCAGTAAATGGAATTCCATGCATCCCATTCTCTGCTGGGCAACCACATGACACACAGCTTCTTGATGTCATTCTTCCAC TTCTGAAGCAACTCTCTAAGCAGAAAGATGTAAGACCTATGCTCTATGAAAAGTTCCACATGCCTGATTGGTTCCAAAAGCAAGGGATTCCAGCTTCCTT CTGGACATAGTAGGATTCAGATCATTTGCCATTAAGGTCTTTCTTCTTCTTCTTTTCCTTTTTTGTGAAATTCTTAATTGTATTGGTGCAAGCGCAGCCG CCGATGACCCAATAGATTTTTTTGTATATCACCAAGTTGTTTCAGGAGCATCCAGTGTTCATCATTTATGTATGTAGATTGCCAGATTGCTGATTATTGT TTATAAGCTCACAATCTGTTGGGAATTATGCTGATTCTTGTTTATAGGCTTCTTCCAATCTGTTGGAAATTATCTCATTTCTCTCTTGTACAATTATTTA TCAAGAATCATTTGTCCCTTGTACAATTATATAAGATTTGTATGAAATCCATTAATCACTAATGGAGCCTCCTGAATGTATTCGGAGGGCACTTCTTTGA ACTCAAGAAAATTTAACATTACACâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_67093; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_53001
| Blastp | Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 from Mus with 32.26% of identity |
|---|---|
| Blastx | Mitochondrial import inner membrane translocase subunit tim50 from Schizosaccharomyces with 33.07% of identity |
| Eggnog | CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190) |
| Kegg | Link to kegg annotations (227292) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433625.1) |
| Pfam | NLI interacting factor-like phosphatase (PF03031.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |