Ll_transcript_53002

• Id Trinity: FTRINITY_DN57245_c3_g1_i12
• Name Transcript: Ll_transcript_53002
• Sequence: TTCTTTTCTTTGTGTCATCTTCATTATATACCTTTTCACTAATAAACTAGATAAGCATAAATTAAAGAATAATGATATATGATATAAGTCTTGTAAATTA AATCCTTTCTTCCTCGAGCTAAACATTTTATCCATCGTCACGCGGCACGGTAGCGCGTGGGACCACAGATTCAGCAAATTCTCTCTCTATTCTACCATTG TTTCTCTCTCTAGACCTGGTCGCAGCACCACCATGACCCCACTTTCTTGAAAGAAAGAAAAATCAAAAATTGACACGATTCTTATATTATATATAAGAAT CGTAGCCACCACGGAATAATCAATCGTCGAAATCCAATGGGCGAGTTGACTCAGACAGAGTTGTACCCATCTAACTCGCCACGAACTCAGCAAGTGTGGA AATCAGTGTTGAGTTGGTTCGGTTTCTTCTTCCAAATATTCTTTCAGATTATCAGAGCCCTTAGTCACTACCCTTTACTCTCTTTCTCTTCTTCTAATTC TAATTCATCTTTCAAGCCCTTACCCTCAATTCAACTCCATCACCACCTTGATTCGCCGCCTGAAACCGCCGTCTCCGATCACTACCCTTCCCAGAAACTC CTGGTAGTACTTGATTTGGATGAAACACTAGTATGTGCATATGAGACATCAAGTCTACCAGCTGCACTGCGCACTCAAGCTATTGAAGCTGGTTTGAATT GGTTTGAGCTTGAATGTGTTTCTTCAGACAAGGAAGGAGAAGGGAAACCTAAAATCAATTATGTTACAGTCTTTGAACGTCCTGGGTTGAAAGAATTCAT AAGGCAACTTAGTGAATTTGCGGACTTGGTGCTATTTACGGCTGGTCTTGAAGGTTATGCTAGACCCCTTGTTGACAGAATAGACATAGAAAATCGGTTC AGTCTTCGACTTTATCGGCCTTCAACAACCAGCACGTAAGTGCTTCTGCCTCATTTAAGTCCCACTAATCTTTCTTGTCGCTCCTTTATTGCTAGTAGCC AGGCAACTAGTGTGAAATATTTTTTATAACTAATTTGATCTTTCTTTCTGGTGTTTTGTTCCTTGTTCTTTTGATACCAACCTATGTCTTCATGTTCTTT CCCTGTCTTCTTTACAGCCTTGAGTGGAGATCATTTTATCTTGGCAACAACGATAAAACACCTATAGATACTGCTATTTTCTCAATAATATGAAATTTGA CAAATATGAATACTTTATTACATTTTAAATTGTTTAGTTATCTATGTTTTTGAGCTTGAAGTTCAGAGTGGAGTCTTCCAAACGTAGCTGTACAAGTAGT CTTATTTATGCTGGATTCATGCAGGGAATATCGGGAACATGTCAAAGATCTTACCTACATCTCAAAGGATCTATGCCGCATTGTTATTGTAGATAACAAT CCCTTCAGCTTTTTATTGCAACCAGTAAATGGAATTCCATGCATCCCATTTTCTGCTGGGCAACCGCATGACACACAGCTTCTTGATGTCATTCTTCCAC TTCTCAAGCAACTCTCTGAGCAGAAAGATGTAAGACCTATGCTCTATGAAAAGTTCCACATGCCGGATTGGTTTCAAAAGCAAGGAATTCCAGCTTCCTG CTGGACATAGTAGGATTAAGATCACTTGCCAGTAAGGTCTTTCTTCTTCTTTTCCTTTTTTTTGTTGATATTCTTAATTATATTGGTGGAAGCATAGACG CCAATTGGCACATCCGGAGGTTTCAAATGCTGCTTCTTGGAGTCATGTCCGTTCCTCATTTAAGTATGTAGATTGCCATAATGTTGATTCTTGTTTATAG GCTTGCTTTGTGTTGGGAATTATGCTGATTCTTGTTTATAGGCTTGCATAGTTGCATTCTGTTGGGAATAATCTCATTAGTAACTTGTACAATTATTTAT CAATAATCATTAGCAGTTCAAAAATTCATTACATTGCTTAGTGACAGAATCTCTGAAAGTATATCACAATGTTTTGTTGTATCAGTAAAGAAGAAAAAGC TGTTAGTATTGAGCTTTTAAAGCTGTTATTGTACTTATTGGTCTTGGTCATTAGCAGAAATACTATGCTTTTGGCGCTTTTTTTCTTTACTTTATCCCCC CTTCTTAATTTCTGGACAAGGATCTGCTGTCCCAAATCTTGTCCTAAAGTCTGTATCAAACTAATAACATGTCACATCAGTCAAAAAATTAAACGTTCAT ATTTTTATTTATTTTTTCTTCACTCTGTTTGACTTTGTACATGGTTGGG
• Tissue: flowers
• Gene name: LI_gene_67093;
• Additional information: details;

Expression of Ll_transcript_53002

FPKM

• FPAB: 20.6
• FPNAB: 3.4
• LF1: 0.7
• LF2: 1.4
• LF3: 2
• LF4: 5.2
• UF1: 1.3
• UF2: 0.6
• UF3: 4.5
• UF4: 6.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_53002

• Blastp: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 from Mus with 32.26% of identity
• Blastx: Mitochondrial import inner membrane translocase subunit tim50 from Schizosaccharomyces with 38.89% of identity
• Eggnog: CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
• Kegg: Link to kegg annotations (227292)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433625.1)
• Pfam: NLI interacting factor-like phosphatase (PF03031.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;