Ll_transcript_53005

Id TrinityFTRINITY_DN57245_c3_g1_i13
Name TranscriptLl_transcript_53005
SequenceACGCAATGATGCTCTGTCATAAATCATGTTCATTGATAAAATATGGAGCTCTAGGTCTTTTTTTATCTTTTCCCTTATGGTTTTTCTTGGTTTCTATCTT CCTCTAGGAATTGAACAACTTTCATTTGATCTACTCTCCTTAGTTGGGCTTCTACCAGCCCCTCCACACTTGTCCAAACCACCTAGGCGTGACTCTATCA TCTTTTCTACAATAGGAGCTACTCCAATTTTCTCCTCGATGCATTCATTTCCAATACTATCTTGTTTGGTGTGCCAACTTATCCAACACAACATTCTCAT CTATGCTACATGGAATCTATTCTCTTGTTAGCATTTTATAGCCCATTTAGTCTCATAACATTGTAGGTCTTATAGTCGTGTAGTAAAACTTTCCCTTAAG TTTGAGCGATACAATTTTATCACAAATGACACATCAAACACTCCACCATTTCATCTAACCCACTAAATCCTATGGTTCATATCTCCATTAGTTTCCACAT AAGTCTTGTATGATTGACCCAATTTTTTGGTATACCAAACTATTCTACTATGTATAACTCAAAACATGGCTGAAGTTAGAGGGTGCCATGTCAAACATGA GATTCACAGTGTTTTGATTTTCAATCTTTGAATAAATAAATCTTCTGAAGTGAAATTGTCAATAGAGAGGAAAACTAGCAAGGTTGAACTCTTTTTTGTT AAAACAAGAAAGAAAAGCTGTTATAAGGTGCTATTTTGATGAGCTGTTATAAATTTGCATAAGATGCCATTCTTTTATTTTGTTTCTTTTGTTCCTTCCT CCTCATCCCAAATCTTCTCTTCCAATCTTATTACAAGTTTCCTATAGTGTAGATTCTGATCTTACATGTGCACTTGTAGGTAGTACTTGATTTGGATGAA ACACTAGTATGTGCATATGAGACATCAAGTCTACCAGCTGCACTGCGCACTCAAGCTATTGAAGCTGGTTTGAATTGGTTTGAGCTTGAATGTGTTTCTT CAGACAAGGAAGGAGAAGGGAAACCTAAAATCAATTATGTTACAGTCTTTGAACGTCCTGGGTTGAAAGAATTCATAAGGCAACTTAGTGAATTTGCGGA CTTGGTGCTATTTACGGCTGGTCTTGAAGGTTATGCTAGACCCCTTGTTGACAGAATAGACATAGAAAATCGGTTCAGTCTTCGACTTTATCGGCCTTCA ACAACCAGCACGTAAGTGCTTCTGCCTCATTTAAGTCCCACTAATCTTTCTTGTCGCTCCTTTATTGCTAGTAGCCAGGCAACTAGTGTGAAATATTTTT TATAACTAATTTGATCTTTCTTTCTGGTGTTTTGTTCCTTGTTCTTTTGATACCAACCTATGTCTTCATGTTCTTTCCCTGTCTTCTTTACAGCCTTGAG TGGAGATCATTTTATCTTGGCAACAACGATAAAACACCTATAGATACTGCTATTTTCTCAATAATATGAAATTTGACAAATATGAATACTTTATTACATT TTAAATTGTTTAGTTATCTATGTTTTTGAGCTTGAAGTTCAGAGTGGAGTCTTCCAAACGTAGCTGTACAAGTAGTCTTATTTATGCTGGATTCATGCAG GGAATATCGGGAACATGTCAAAGATCTTACCTACATCTCAAAGGATCTATGCCGCATTGTTATTGTAGATAACAATCCCTTCAGCTTTTTATTGCAACCA GTAAATGGAATTCCATGCATCCCATTTTCTGCTGGGCAACCGCATGACACACAGCTTCTTGATGTCATTCTTCCACTTCTCAAGCAACTCTCTGAGCAGA AAGATGTAAGACCTATGCTCTATGAAAAGTTCCACATGCCGGATTGGTTTCAAAAGCAAGGAATTCCAGCTTCCTGCTGGACATAGTAGGATTAAGATCA CTTGCCAGTAAGGTCTTTCTTCTTCTTTTCCTTTTTTTTGTTGATATTCTTAATTATATTGGTGGAAGCATAGACGCCAATTGGCACATCCGGAGGTTTC AAATGCTGCTTCTTGGAGTCATGTCCGTTCCTCATTTAAGTATGTAGATTGCCATAATGTTGATTCTTGTTTATAGGCTTGCTTTGTGTTGGGAATTATG CTGATTCTTGTTTATAGGCTTGCATAGTTGCATTCTGTTGGGAATAATCTCATTAGTAACTTGTACAATTATTTATCAATAATCATTAGCAGTTCAAAAA TTCATTACATTGCTTAGTGACAGAATCTCTGAAAGTATATCACAATGTTTTGTTGTATCAGTAAAGAAGAAAAAGCTGTTAGTATTGAGCTTTTAAAGCT GTTATTGTACTTATTGGTCTTGGTCATTAGCAGAAATACTATGCTTTTGGCGCTTTTTTTCTTTACTTTATCCCCCCTTCTTAATTTCTGGACAAGGATC TGCTGTCCCAAATCTTGTCCTAAAGTCTGTATCAAACTAATAACATGTCACATCAGTCAAAAAATTAAACGTTCATATTTTTATTTATTTTTTCTTCACT CTGTTTGACTTTGTACATGGTTGGG BLAST
Tissueflowers
Gene nameLI_gene_67093; 
Additional informationdetails; 

Expression of Ll_transcript_53005

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_53005
BlastpMitochondrial import inner membrane translocase subunit TIM50 from Phytophthora with 39.73% of identity
BlastxMitochondrial import inner membrane translocase subunit tim50 from Schizosaccharomyces with 38.89% of identity
EggnogCTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019433625.1)
PfamNLI interacting factor-like phosphatase (PF03031.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;