Ll_transcript_52990

• Id Trinity: FTRINITY_DN57245_c3_g1_i6
• Name Transcript: Ll_transcript_52990
• Sequence: CTTCCTTCAAATATGCGATCCAGACAATGGTCACACAAATAAGACAAAACGCTCCACAGTAGCGCGTGGAAGAACAGAATCATCAAATTCTCACTCTCTT CTATTCTGCCATTTTCTCTCTCTAGACCTGGTCGCACCACCACCACCATGACCCCATCTCCTTGAAATATATAATAATACCCCATTGCTGCATAACAAAC ACATCGAAATCCAATGGGCGAGTTGACTCAGACAGAGGTGTACTCTTCATCGCCGTCGAACTCGCCACGAACTCAGCAACTATGGAAGTCAATGTTGAGC TGGTTGACTTTCTTCTTTAAGATTATTAGAGCACTCGTTCACTACCCTTTACTCTCTTTCTCTTCTTCTAATACATCCTTCAAGCCTCTACCTTCAATTG AACTTCACGGCCACCATGATTCCGCCGCCGCATCCCTCGAAATCACCGATGCCGATTCCGGTCACCACCCTTCCCATAAACTCATGGTAGTACTTGATTT GGATGAAACACTGATATGTGCATATGAGACATCAAGTCTGCCAGCTACACTGCGTACTCAAGCTATCGAAGCTGGTTTGAATTGGTTTGAGTTTGAATGT ATGCCTTCGGACAAGGAAGGAGAAGGGAAATCGAAAATCAATCATGTTACAGTATTTGAACGTCCTGGGTTGAAAGAATTCATAAGGCAACTTAGTGAAT TTGCAGAGTTGGTGCTGTTTACTGCTGGTCTTGAAGGTTATGCTAGACCCCTTGTTGACATAATAGACATGGAAAATCGGTTTAGTCTACGACTTTATCG GCCCTCAACAACTACCACGTAAGTTGTTCTGCCTCATTTTCGATCCACTAATCTGTTTTTATGTAACTAATCTTTCTTGCTGCTCATTCATTACTAGTAT CCAGGCAACAATACATGAATTATGTTTTAGAATTCATTTGATCTTTCTTTCTAGTCCTTTATTCCGTGTTTTTTTGGTACTTCTTATATAATCCATGTTC TATCCGTCTTGTTTACAAGTTTGAGTAGAGATCATTTTATCTTGGCAACACTGATAAAACACCTACAGATACTGATATTTGGTGCAAGCTTGTCGCATTC ATATGATATCACTTGACTTTCTTGGACTTAGTGTCTTTGCTAAGTTTTAAACCGGAGAAAACTTCTGTGGCATTATAGAAGAACTACGCACCAAAAATTC TCTATTGATTATTTCTAGATTATTTTTGTTTGCACATTTACTTAAACATTTATGTTTATGTATTTACTACAACTTATATAATGATGATATATATGTGATA TGTCTGTGATCTCACTTTAGTAACTAGAGTGTGTCTGAATCTTGAGGATTTGTCCCATAAGCAGTTCAATGGGTTGAACCTATAAGTCTTAGATTTCTGG CCTCTGTAAGTCTTAGATTTCTGGCCTCTGTAAGTCCAAACACACATGTATGTTTGTGCTTATTATGTATGTGACAATTTAATTCTTTCCTTTACACATT ATCTTCAGTTAGTGCACAGTTTGTGGGATAGAAGTTTTTCAGCAATATCAAATTTGACTAATCTGAATCCTTAATTGATTTTTGAAGTTATTTAGTTGTC TATGTTTTTGAGCTTGAAAGTTCATAGTGGAGTCTTCTGAACGTAACTGTACAAGTGTTCCTATTAATGCTTCTTGCAGGGAACATCGGGAACATGTCAA AGATCTTACCTACATCTCAAAGGATCTATGCCGCATTGTTATCGTAGATAACAACCCCTTCAGCTTTTTATTGCAACCAGTAAATGGAATTCCATGCATC CCATTCTCTGCTGGGCAACCACATGACACACAGCTTCTTGATGTCATTCTTCCACTTCTGAAGCAACTCTCTAAGCAGAAAGATGTAAGACCTATGCTCT ATGAAAAGTTCCACATGCCTGATTGGTTCCAAAAGCAAGGGATTCCAGCTTCCTTCTGGACATAGTAGGATTCAGATCATTTGCCATTAAGATTTTTTTG TATATCACCAAGTTGTTTCAGGAGCATCCAGTGTTCATCATTTATGTATGTAGATTGCCAGATTGCTGATTATTGTTTATAAGCTCACAATCTGTTGGGA ATTATGCTGATTCTT
• Tissue: flowers
• Gene name: LI_gene_67093;
• Additional information: details;

Expression of Ll_transcript_52990

FPKM

• FPAB: 0.1
• FPNAB: 0.1
• LF1: 0.3
• LF2: 0.1
• LF3: 0.2
• LF4: 0.2
• UF1: 0.2
• UF2: 0
• UF3: 0.2
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_52990

• Blastp: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 from Mus with 28.5% of identity
• Blastx: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 from Mus with 28.23% of identity
• Eggnog: CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
• Kegg: Link to kegg annotations (52468)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461300.1)
• Pfam: NLI interacting factor-like phosphatase (PF03031.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;