Id Trinity | FTRINITY_DN57253_c0_g2_i1 |
---|---|
Name Transcript | Ll_transcript_54874 |
Sequence | CACGAACTCAAAGAACACATAGCATCAACATCAACATCATCATCATCATCATCTTCTTCAGACGGCGACGCTTTGGTGGTTCGGTTCCGAACCGTTCTCC CGAACCTCCTCCACACCTATATCCACCCTTCCTCCGCCAACGAGAGAGAAGTTATCGCCGTGCTGAAACTCATATCTCACACCGCCACCAATTTCCCTCG TGTTTTCTACCATTCCACCGCTTCTTCTATTTTACCTATTATTGCTCACATTTTCCCTTTCTTTCTTACCCCTCCTTTTCGTTCTCGTCATCCTCTTTTC TTTCAAACTCTCTCTTCTCTTCTTTCTTTGCTTCGATCCCTCTCTCGTGATTCTTACATTCACTTCTTCCTTGATTCCGTGTTACTCATTCAAGATATTT TACATGTGGCTTCACTGCCTTTACACAACGCGGGTGAGAATGGATCATCTAGGGTGACATTGAAGTGCTTTTGTCGGTTATTCTCTGGGGTGGAAGATAT CCCGTTGGCTAATAAACCTGGGGATGGATGTGGTTTATTGGTTGATCTTACTGGCGAAAGCCGATGGCAACCTTTCGCTACTTGGATTTTAAGGCTTATT AGTAAATGCATAACGGAAGGGACACTGAGTGTCAAAGGGTTGATCAATGCGTCGTTTGTTCATGCTGCGTGTTCTCTTTTATGCTATGGTGATGCTGATT TGCAAATGGCATGCTTTGACTTTGTATACATTCTCGGAACGGTGACAGACTATGATATCATTCCGTATCACAATTTAATCCTAACAATATCTACTATCTT GAATCTGGACAAGGAGGGGTTTCCTGTCTTCAGAAACCTGGCATATGATTCATCAATGGGTATTTGCCTCAATTTGCTTTACTCTAACTGTACAGAAGAT GTTGTCAAGTTAACTGCTGCTGATTTAGTCAGTGTATTCCTCCAATCAACATGGAGAACCAAAAGCCAGGAACTTAAGGTTGCACTATTCAGTGCCTATG CTAGGATTGCTCAAGTTTGCCCCCCTCATATCTGGAAGCCAGAATATCTCATTTCTGTACTCTATCATCCAGAACCATTATTGCCTGCCCTAATAGACTG CTTTCAAGTAGCTCTATCTACTCTCGGTCCGAGTCTTGTTGGGGGAGTCCACAAAAACAAGTTGTTGACCATGTCATCTGAAGATAAGTCAATTGAAAGC AGGACACTTGGCCAAAAGAGACCCGTCCAGGATATGGATAATTTAAAGATCAAGCGACAAAAAATAAATGAAGAAATTATTGTTGCAGATGCAAGTGTTG AGGTGGAATGCAAATATACTCATTTAGTTACTCTTCAATTGGTGAAAGATTATGCTAACCATATGAATAAATCTCTTCTTGCATCTGTTCAATCATTAAA TGCTCCTACTGTCGAACATAGTTCTTTGAAACCAGCTAATGCATTGTCTGCACTTAGCAAGCTATGCATTGCCTTCTCTAGTTATCCAGAGACACATCTG TCACTCAAAATTTTCCAGCAGATGCTTGCATGGCTTCCCTGGATAGTTGAGCAGGCAAAACAAGGGAATTCGATCACGGTTGATATCTCCACCTACCTGG AAGGACTTCACAGTGTATTGCTATCACAGGGTGCCTCTTTCATTGAGAACAACCTATTACAATATCAAAATAACTGTGCAGACCTTACACATGTAGTGCT TAAACTTCCCTGGACTCATATGCTTCTTGCTGCTGATAGCAGTTGTCAATGGAAAACAAAATGCCTTTCTCTTCAAGTAGCATCCAAGCTAGGCCCATGC TTGAACATTGAAATTGTTCTTGAAATTTTGGATTTGGGTCTTCATGATGAAGCTGAAGAAGTCAGAATTGAAGCTGTCATTTCCATGCCAGTGCTGCTTT TGTGGTCTGCTCACGATGTATCACCTATCTTTAAAACACTGGAGTACTTAAAGAGAGATGATGAGAAGGTTAAAAAAATTGTTCCCATATCTCTTGGCCT ATTGTCATGCCTTTATGGATGCAGAAGATCTGGAGCAGGTTTACATGTAAATGAATGCAAATTATTTCTAAACATGAACAGTGGTAAACCATGTTGGACG ATAGATCAATTACTTCAAGGTTTCAACTGTTCTAAATGTGACCAACAAGTTATATACAATCATGATAAGCAACATCCTCAAATCACTCATCGACCTGATA TGCATGGAGCAGATGCAGATCTTAGTTTGGACTGTAATTTCATCCAACTACAGACTTTATTTTTTGAACTTCTTTTTGATGAGTCATCAGAAAATGTCCA GATTTCCTGTGTGAGAGTTATTCATCGGATTCTTGCACATGCAGCTGCTGATATTCTGCTCAAAACGAGATTTGAGTGGATAAAATGCGTAGAATTTTTT CTGATTAGTAGAAGCAAGGAATTAAGAGAAGCATTTTGCAGTCAGATCAGTTCCTTTGTTGATAACCATATTTTGAGTCTAATTTTTTCTGGAGGCACTG ACAAAGGTAAAGAACAAAAATTCTTGGATGCAATTAAATATGCTGTGGCAGTGGCTGAAAGTCCACAAATATTAGAGACACTACTGGAATGTACTGCAGA AATAATGGTTGCTGTTGATATAGATAGTAAATTGTTCCTGTCTTCTCTTATATTGTTAGTTGATCAGCTTGACAGTGTACATGTGACTGTAAGAGTCAAT GCATCAAGGTTAATACAGAAATCTTCCTGTTCCCATCTTAAAGGAGGACTTGAGTTAATTCTTGCTAAAGATGTTCATATTCGTATAGAACTGTATGATT ATCTCTCTGAGAGACTCGCCAGCCGCCCAATCTTAGTGAGGGAATTTGCAGAAGCTGTTTTAGGCGTTGAGACTGAAGAGCTTGTCAAGAAAATGGTTCC TTTTGTTCTCCCAAAGCTTGTGGTGTCTCAGCAGGATAGTTCTCAAACCCTTGACACCTTATATGAGTTGGCCAAGTGTTTGAATACAGATATGGGGTCT CTGATAGTTGATTGGCTGCCAAAAGTACTTGCTTTTGCTCTACATCAAGCAGATGACCAGATGTTACTTTCTGCCGTGCAGTTTTACCATGAACAGATTG GTTCTGACAAGCAGAAAATATTTGCGGCTGCATTACCGGCTCTTCTAGATGAACTTGTTTGCTTCACAGACGTTGGTGATTCAGATGAGATAAGTAGAAG ATTAGCCAGAGTGCCTGAGATGATTAAGGGAATAGCTAAAGTTCTAACAGGTGGGGAAGATCTTGCAGGGTTTTTGAGAAATCATTTTGTTGGCCTTCTG AATGGTATAGACAGAAAGATGCTCCATGCTGATGATTTTGTGCTTCGGAGACAAGCGTTGAAGCGTATTAAGATGCTGATTAGAATGATGGGTTCTCATC TGAATACTTATGTGCCAAAGTTGATGGTTCTTCTCATGCATGCTATAGATAAAGAACCACTACAAAAGGAAGGTCTCTCTGTCTTGCATTTTTTCATAAA GCAATTGGCTAAAGTATCGCCATCTAGCATTAAGCATATAATTTCTCAAGTTTTTGCTTCCCTTCTTCCCTTCTTGGAGAGAGACAAAGAAAATCCTTCG ATGCATTTGGACAAAGTGGTAAAAATTCTAGAAGAACTTGTTTTAAACAACCGGATTATCCTAAAACAGCATATATCTGAGTTCCCTCCATTGCCGAGCG TTCTTGCTTTGGCGGAAGTAAACAAAGCAATTGAGGATGCACGTGGGTCAATGACTTTGAAGGATCAATTACGAGATGTAGTTGACGGTTTAAATCACGA GAACTTAAATGTGCGGTACATGGTAGTGTGTGAGCTTCGCAAGCTTCTGAACATTAAATGGAAGGATGTTACAGCTCTAATAACTGCTGAAGCTGGTTCA GATTTGGATGTCTTAAGTTCTTTGATCACATCATTATTCAGAGGATGTGCAGAAGAATCAAGGAACACAGTTGGGCAGCGATTGAAGTTAGTTTGTGCTG ATTGTCTTGGAGCCCTTGGTGCTGTTGACCCTGCTAAAGTAAAAGGTTTTTCATGTCAACGTTTCAAAATTCAATGCTCTGATGATGACCTTATATTTGA GCTGATCCACAAACATCTAGCTCGGGCATTTAGATCGGCACCCGATACTCTTATTCAAGATTCTGCTGCATTAGCTATACAGGAGCTTCTAAAATTTGCT GGCTGTGAGGCATCACTTGATGAGAATGCATCAACTTATACATCACAGGCACAAAAGGATGGGGATGATAGATGTGGTGTTGCATCTAAGATTAAGAGTA CTAATGGGATGAATAATAGGGGTCAGAGATTATGGGATCGTTTCTCTAATTATGTGAAAGAGATAATAGCCCCATGTTTAACATCTAGGTTTCAGCTCCC TAAAGTATCCGATTCAACATCTGCTGGCCCGATATACCGCCCATCTATGTCATTTAGAAGTTGGATATTCTTTTGGATAAGAAAACTGACTGTTCATGCT ACTGGATCTCGTGCAAGCATCTTTAATGCTTGTCGTGGAATTGTGCGCCATGATATGCAAACAGCAACATATTTACTTCCATACTTAGTTCTTAACGCTG TTTGTCATGGTACTCAGGAGGCACGTCACAGCATAACCGAAGAAATCCTATCTGTTCTTGATGCAGCTGCATCAGAGAACAGTGGTGCTTCAGTTCATGG ATTCAATGGTGGTCAAAGTGAAGTTTGTATTCAAGCCGTGTTTAATCTTCTTGATAATCTTGGACAATGGATGGATGATGTTGAACAAGACCTTGCCCTT TCCCTTTCTCAGTCATTGGTTTCTAAGCAACAAAAGTCAAAAGATCAAAGTTCAAATTCCTTGACAGATCAGGAACAGCTCCTTGTACAGTGTAAATATG TTTCAGAGCTTCTATCTGCGGTTCCAAAGGTGACTCTTGCTAGGGCTTCCTTTAGGTGTCAGGCATATGCAAGGTCCTTCATGTACTTTGAGTCTCATGT AAGGGGAAAGTCAGGTGCTTTCAACCCTGCTGCTGAGAGGAGTGGCGTCTTTGAGGAAGAAGATGTTTCACATCTTATGGAAATATACAGCTGTTTAGAT GAGCCAGATGGACTGTCTGGTTTGTCATGTTTAAGTAAATCTTTGAGGTTACAGGATCAGCTATTGATAAACAAAAAGGCTGGGAACTGGGCTGATGTTT TAACTTTCTGTGAACAGTCTTTGCAGATGGAGCCAACTTCAGTTCAAAGGCATTCTGATGTCCTTAAATGTTTACTAAATATGTGCCACCTTCAGGCTAT GGTCACTCATGTTGATGGTTTAATTTCTAGGATTCCTAGGTACAAGAAGGAGTGGTGCATGCAAGGTGTGCAGGCAGCCTGGAGGCTTGGCAGGTGGGAT TTGATGGATGAGTACCTTAGTGGGGCAGAAGAAGAAGGTTTAGTTTGTAGCAGCTCTGAAAGTAATGCTTCATTTGACTTGGATGTTGCAAAGATTCTCC AGGCAATGATGAAGAAGGACCACTTCTCAGTTGAAGAGAGGATAGCATTATCCAAGCAGTCACTAATTGCCCCCCTTGCTGCCGCAGGCATGGACTCTTA CATGCGTGCGTACCCATTTGTGGTAAAACTTCACTTCCTACGAGAGCTGGAGGAATTCCATTCTCTTCTGGGTGATGACTCCTTTTTAGAGAAACCATTT CGTGTAGGTGATTTAGGGTTTGCTAAATTGGTGGATAACTGGGACAATCGACTCCGATTTACACAGTCATCACTTTGGGCTAGGGAGCCTCTCTTGGCTT TCAGGAGGCTGGTTTTTGGTGCAAGTGGTCTTGACGCTCAAGTCGGCAATTATTGGCTTCAGTATTCAAAGCTATGTCGCTCGGCTGGGCATTATGAAAC AGCCAACAGGGCAATATTGGAAGCCCAGGCGTCTGGTGCACCTAATGTCCACATTGAAAAGGCGAAACTTCTTTGGAGCACACGACGGTCTGATGGTGCC ATTTCTGTCTTGCAACAATCTCTCTTGAACATGCCTGTTGAGATTTTAGGCTCTGCTGCAATAACATCAATTACTAGCCTTTCCCTCTTGCCACTTAACC CCCCACCTATTGTCTCTGAAAGTCAAACTGTAAATGAGAACATAGATATTGCAAAGACTCTTCTTCTGTACTCAAGGTGGACGCATTACACTGGGCAAAA ACAGAAGGAAGAAGTAATAAGTCTTTATACCAGGGTGAGGGAACTGCAGCCAAAATGGGAGAAGGGATACTTCTATGTGGCTAAGTATTGTGATGAATTG CTTGGGGATGCCAGGAAACGCCAGGAGGAGAATTTTGAGCTCGGTCCTAGATCAGTTTCTTCAGCAATTGCTGCTGCTGGCTCTTCAAACTTGAATGGTG AGAGGCGTTGGTGGTCCTATGTTCCCGATGTGCTGTTATTCTATGCAAAAGGACTTCACAGGGGACACAAGAATCTATTTCAGGCACTTCCAAGGTTATT AACCCTGTGGTTTGATTTTGGTAGCATTTATCAAACAAGTGGTTCATCCAACAAAGATTTAAAGAATGTGCATGTGAAGGTAATGAGTATTATAAGAGGC TGTTTGAAGGATTTACCAACATACCATTGGTTGACGGTGCTTCCTCAATTGGTTTCAAGAATTTGCCACCAGAATGAAGAAATTGTTCGAGTGGTCAAGC TCATCATTACCTCTGTTCTCCGCCAGTATCCACAACAGAGCCTATGGATTATGGCGGCAGTTTCAAAATCCACTGTTCGTTCTAGGCGGGAAGCAGCAGC TGAAATCATACAAGCTGCACGCAAAGGTTTCAGCCCGCGCACTGATGAGAACAGCTTGTTTGTTCAATTTGCTAGCCTTATTGACCATCTGATCAAATTA TGCTTCCATGCTGGCCAGTCAAGATCGAAGACAATTAATCTCTCAACTGAATTTAGTGCTCTAAAGAGGATGATGCCCCTGGGAATTATTATGCCAATTC AGCAATCTCTTACTGTTAATCTACCGACATATGATGGAAATCCGGGCGATTCACCTATGTCTAATATCTTTTCTGCCACAGATCTTCCTACTATATTAGG CATTGCTGACGAGGCTGAAATTCTTTCATCTCTACAGCGACCTAAGAAAGTCATTCTACTAGGCAGTGATGGCCACGAACACCCATTTTTATGCAAACCC AAGGATGATCTCCGCAAAGATGCCCGCATGATGGAGTTTAATGCAATGATTAACAGGTTGCTATCAAAATATCCTGAAAGTCGTCGAAGGAAGCTATATA TTCGCACATTTGCTGTGGTTCCTCTGACGGAGGACTGTGGTATGGTAGAGTGGGTACCCCATACTCGTGGACTTAGACAAATTCTTCAAGACATCTATAT TACCTGTGGAAAGTTTGATAGGCAGAAAACAAATCCTCAAATTAAACGAATTTATGATCAATGCCAAGGGCCCGCGTTGCTTATGCTCACACAACTGCAG TTTGGTCAATGGTTGGTCACATTGTGGGGCTGGGTGATCGGCACGGTGAAAACATTCTTTTTGATTCTACCAGTGGTGATTGTGTTCATGTTGATTTCAG TTGCTTATTTGACAAAGGCTTGCAGTTGGAGAAGCCCGAGCTTGTTCCTTTTAGGCTAACACAGAACATGATCGATGGCTTAGGCATCACTGGATATGAG GGTATCTTCTTGAGGGTTTGTGAAATTACACTTTCAGTTCTGAGGACACACAGGGAGACTCTCATGAGCGTGCTTGAAACTTTCATTCACGATCCTCTTG TCGAGTGGACAAAATCACACAAGTCTAGTGGAGTAGAAGTTCAGAATCCACATGCACAGCGCGCTATTAGTAATATTGAGGCAAGGTTACAAGGAGTGGT TGTTGGTGTTGGGGCTGCACCATCATTGCCTCTTGCTGTAGAAGGTCAAGCTCGTAGACTAATTGCTGAAGCAGTCTCTCACAAAAATCTTGGAAAGATG TACATCTGGTGGATGCCTTGGTTTTGAAGAATTCGATGAATCGATAAGATCTTCTCATAACAATTCAGTTAGGTATGACATCATTAGTTTCACATCCTCA ATGCATGGCGTCTATATACAGAATGGAAGTAATCTAGAGATTGAACCAGCAAGCAGAGGAAGGAAATAGGAATGGTTCAATATGATCTTTTTGGGCAAAG GTAACCTTTGACTATGGGGATATCATAAAAGAATGTACAAAGTAGATTTTTGGTGCTGCTACAGAATGTATTTGGACCTGAATAGGCAAAACTTGGTGAC ACAAAAGATTGAACTTCAACATGACTGACAGAAATTCATCCCATAGAGTTGTATATATAATGGTTGTATTCCCTTGTAAATGATGAATGTATAAAATGCC ATTACTCCTTCCATATGATATAGTCCAATGCATATAAATCTAACGTAGTTTTATCTTTCTCTCTTGTCCTGTCATAGTTTCATTTTTAAAAGTAACACCT TCTGAATTGAACTTATTATTCACAAAAAGAAAAGCTTGAATTGTTTGATTGTTTTAATGTATTTAGCTTCTAGTTTCTATTCAACCCAGATGTAATTCCC TTTCAATGTTCAGTCCTGCGTACTTTAAGAAACTCATGGTTCTTAATGTTATTGATTTGTTCAATGTATTTAGTAAGTTTAAATGCAAAAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_67145; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_54874
Blastp | Serine/threonine-protein kinase ATR from Arabidopsis with 62.67% of identity |
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Blastx | Serine/threonine-protein kinase ATR from Arabidopsis with 61.16% of identity |
Eggnog | phosphatidylinositol kinase activity(COG5032) |
Kegg | Link to kegg annotations (AT5G40820) |
CantataDB | Link to cantataDB annotations (CNT0002379) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441707.1) |
Pfam | UME (NUC010) domain (PF08064.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |