Ll_transcript_53795

• Id Trinity: FTRINITY_DN57254_c0_g1_i8
• Name Transcript: Ll_transcript_53795
• Sequence: ACTTAATAATGTTTTTTTTCTCTGAAACCCCAAAACCCTCGTTAGTGAGAAGAAGAAAACTTCAAACTTTCAATGCTCTATTTGTATTCTACGCAACATG ATTCGCATATATACTGCAAACTCTTAACCACACGATCAAAATCTAGTTTTTAATCTTGACCGTGCATAACTCAGAAGAGTGTTAGATTCAACGGTCAAGA TCAGATCTTCCATTCAATCATCAAAAAGTGACACCTAATTATCTTTCTCTCTCTTCTCTGAGTCCTTGTTTCTGTGAATGAAACCCAACCCAAATTCAAT TCACGAAAATTGAGTCCAAAGTTTGCATCTTTCACCAACTGGGTTGGTTCCAACACCTTCAATTTTTGGGTACAACGAGGTTTGGGTTGGCTTTGCATAA TTTGTGGAGATACTGAAGCTATGGAAGCTTATAAGAGATGGGTGAGGCAGAAAAAAAAGACTATGTACACTCTTTGGAGTCTTTGGCTAATGGGTTGACA TGGCTTTTTCCAGAGCGGTTTTTGGAATCAGATATTGGACCAGAAGCAGGTTTTGTGAAATTTTGATAACCTTCGGCTACTTCTTTTCAGTTTTAATTAT GTTAGACTTTCTCTCACTTCAAGAATAAAATGGTAAGCACAATAATGTGACTGTACTAGCAAAAATTAGGACCTTCTGGTTCTATTCCAATGATTTCTTT TGGTACATTCGAAAGAAAAAAACAAACTAAGCTAACAACGAAATATCTAACTGCAACAACGGTTGGCAATCTGTTGGGATTGAGCCCCAAATCTTCATCA CATCTAGTGAGTGAGAACCTAATTTTGCCACGAAATCTGCTGCCATATTAGCCTCTCTATTGACAAAGCAAACCTTGACGACCCAAGAAAGAGCCAACCA AGATCTGATCTTGTTGATCAAAGATAGAATGCTAGCAATTCGAATAGGAATCTCCTCAGAAATAATATGCACAGCTTCCAAGCAGTCGCTTTCCAAGACC ACATTCCTGAAACCTAGACGCCAAGCCAGCGACAACCCATTTTCGATAGCCAAAAGTTCTGCTAGAATAGAGGTCCCCTCACCATAGTTAGCAAAGAAAC CCGATATCCATTGACCTTTAGAATCCCAAAGAACGCCGCCCCCTCCCATTATGCAAGAGCTTCTGATGCAACTACCATCTACACTCAATTTGACCTGGCC CAACTCCGGGTAGCTCCAATGAGTCATGGGGTACCTTTCCTCTAAAGACCGAGAACCGCCATAGTTGTGCCACTCCCAAAAATCCTGGTGAGTAAAGCGA ACCACCAAATTGATATCCCACTGAGTATCCCCCATAATAGTGTTATTCCTCCATCTCCAAGTCCACCAAATACCTGTCAAGAAGAGAAGACCATTTTTGC CATTATAATTCCCCCACAACCAGCCCTTAAAAGACTGGGGTATCCAGAATCTAGGCGACGTGAAACCCAAGCGAACCCACAAAGATGATGAATCCTGACA ATCCTTAAAGATGTGCAAGAGATCCTCGACACCCACCTGACACCTAACACAATTTGGGCTTGTAGCCAAGTGCCTTCTAAAGCGAAGAGCATTTGACGGA AGAGTGTCATGAAGACCAAGCCAACACATAAGTTTAACCTTCTCAAGAATCCTCAGCCTCCAAACCATTTTCCAGATGTCATCCATAGATGCCACATTTC CTTCCACATCCATAAGCCAGTCATAGGCCGACCTAGCAGTGTAAGAACCTGTAACATGCCCATCCCAAATCCACCCATTAGATTCAGTAAGAGAACCAGG CGAGTAATTTCCACAAATAAACTCCTTCACTTGCAACGGAAACATAGTATACAGTCTAGAAAAGTCCCAATTATCTGCTACCCATAGGTCCTTCACCTGA AGGTGAGTATCAGATATATGGACAAAATCCACATAAGAACAAAGCATCCCCAAACCTGACCAATTTTCATACCATAAGGATTGATCCTCACTTCCCAAAT GCAAGTTATAACCCAGTTTGAGCTTATCAAATGCTCTCACAATGCTTCTCCAGATATAAGACGTTGAAGCTTTTGGGGAGCAACAAATAAAGGATTGTAC ACCAGAGCTTATTGTTGCTACTGATCAAACTCCAACATAATTTTCCAAGAAGGGAAATGTTCGAAATTCTGGCATCCCTTATGCCCAATCCATTATCACG TCTACGCCTTGTGAGAACCTCCCAACTGACAAGATGGAGGCCCCGACTATTAACATCACCACTCCAAATAAAATTTCTCGTCATCCTATTTATGTTATTG CATACAGTGTTAGGAAACCACAAGACCTGCATATAATAAACCGGAATAGAGGAGATGACAGACTTCGCAAGGCATAAACGACTCGCTCTATTCAAGAGAT TTGCTTTCCAAGAAGCCAAACGACACTGAATCTTCTCCAGAATAGGGTTAAAAATTGCCCTACCAACTCTTCCCTGAAGTAATGGTCCCCAAATAATTTC CAAGATTACCAACCACCCTCATGGAACAAAGCCTCATAAACCGGTTCTTCCCCCTGTTGGTCACAGATCTGGAGCAGATAAATTTTGATTTGTCTACACT CACTTTCAAACCCGATGCTTTACAGAAATCATTAAGAGTAGAGGAAACAACCCTAACCTGGGAGTTAGTTGCCTTGCAAAACAGTAAGACATCATCAGCA AAAAGGAGGTGAGAGATACTAGGGCCACCCCGAGAGAGTTTAATAGGATGCCATATGCCACTATCCACCTTCTGAGAGATAAGAAGAGTGAGCTTCTCCA TGCACAAGACAAATAGATAAGGTGACATAGGATCCCCTTGGTGAAGATCCCTACTAGGAGTAAATGCCTCCAGCCTAGAACCATTCCAAAGAAGAGACAC CTTTCCAATGGTTTGTTCATGTTGATCTTGAAAATGTTAGCTAGAAAATAGAAATAAGTTTACTTGGCAGAGCCTTGTGCCTTCTTAGATTCAATATGTT GCAAATTTCTAAAGTCACACACATTACATTCTTCTATTTACCTACATCTCCTATAAAGTATTGCAAATTCTTATTGTCTTTTCTTTTTATCAACTTTCCT CCTATCATGCCTATGATATTGAAATTTCTAGCTTACTTGTCAGATCAACAACTTTGTGCAGTGACTACAATTTTGGGAATTATCATAGCTGTCAATGAAC ATATAATTGATACAGCTCCTACCCAAAATAATACAGGCTCTACTGAGAAATATTTGTTTCCTTATCCATTATGCTTATCTGCATTGAAGGATTTGGAAAT GTTAGTTGAAGTTGTGTCACAACATTACTATGGCGATGATAAGAAATGGAATTTCCTTGCTATTACTGAAGGAACCAAGTAAAGATCATAATCTAATTTA GCATATGTCCCTTCCTTTGTTATCGATCCAAATTTATCATTATCTTCCGTCGCTCTAACTCAGGGTTCTGGTTCGACTATCATTGTTTTGGAAGAGTGGA TATAAGATGCTGCTTCATGGAGGGGAGACATATAATGATGAGACACATTCAGATAGTTTCGCTTCACAACACCAAACAATCTTAAAGCCTGATGGACACC GTGGTTCTGATTATATGAGAAACAATCATGGTCCAAACCCATGGAATCTGGAAGGAAGAGCACTATCTGCTTTAAGTAGTTTCGGAGAAAAAGCCAGAAC GGGGTCAGATCCAATGTGGTTACGTAGGGTTCATCATCAACAAGCAACTCTGGAGCATACTGGTAATCGGTTTTGAAGATTTTTTAGCTGTAGACAGTAA ACTAATTGATTATAATGCTTGTGGAAGTCAACTAGTTCTTGTTGCCCGCTGCATTTTTGCAGTCTCAAGGGTAGAGAGACCAACACTTTCTAGCATATTG TCCAAAAGAGGTCTTCACGGGGTTCTGTTTCTGATTGGCGAAGTTCTATTTATTAGTAGACCACTTATTAATGTTCTATTTATTCGAAAATATGGTGTCC GGACATGGACCCCTTGGTCCCTTTCACTGGCTATTGACTGCATATCAAACAGTATTCTTTCACTTGTTATGACATCTGTAGATGGTGGGGATGAGCAGAA GTTTCATCTTTCTGCTCCAGAAAAGGATGAGGTTAAACGATGGAAGCTGTTATTTTTGTACTTTACCTAATGAGAGATCCATTTCTCAGCAAGTATACTA GGCAAAGACTCGAAAGCACGGAGACAATTTTGGAACCTTTACCTATCATAGGATTTCTTGCAGCAAAAATCGTTGAGCTTATAATTGGAGCGCAAACTCG ATACACTTACATGTCGGGATCATGATATAAAATCTAGAAGAAACACTTCACTGCCTTCCCAGATTGTGGGAAAGCATCTTACTGTGCTCTCACATTATCT CCTGTTCCAAAATTTTCAAATGATGAGGGGATATGAAGTATGCTACTACTTTGATTGAAAAGTAAGAAAAATGGCAAGCTTGAACATTTGTTTTGCACAA TGATGGAAGGTTATGGCTGTCTGCGAATTCAACACCGAACGTGAAACTTTTATTTCATTCGGTTCCTTTACGGACTTAATTCAGAGATGTTGGACAAGTT GATTGCAAGGATGGCTCTACTATCAACATTTGTTTTGAAATTTTTTGCTTTAATTTTAATAATAAAAAAGAGAAATAACAAAAGATACTGATTTGTCAAA AATATTATTAGATGCCAGTGCAAAGATATTATCACACTTGCATACCAATTAAACATTTCATTGTTTTATTCTACTCCCAAACAAAGAGGGTTGGTGAGTC TACCTCAAACACTTGTAGTTATGAGCGTCAGTCAATTGGAAAGTTTATCATGTGATTCTTCAGCTCAGCAAGCTGTATTCTGATCGGAGTTTCAAGACAA ACCGGTTTTTGCCTTGGCCGGCTGGTTATCCGGTGTGGCATGCCTTTTAATAGTCTAATCCGGTTCAACCTTGAATTGGACAAAGACACCTGGTTAGGAC AGGCACAATTTTCACTTCAAGGTTGGACCGGACGAGTCGGACTGCTGGTACGGTTGTACAACAAAGCAAACCATTATTCTACACCTTTGTAGGTATTACA GTTGTTCTGTAGTGATGTAGCCATTTATTATTTTCGCGTGTCATTGTCCTTTTGATGGTTGAACTAAATGTCTCTGTTTGTTAAGGTACTATGAAATTAT TCACAAGCATATTCGTCTTATATATCTGGG
• Tissue: flowers
• Gene name: LI_gene_67147;
• Additional information: details;

Expression of Ll_transcript_53795

FPKM

• FPAB: 0.5
• FPNAB: 0.4
• LF1: 0.5
• LF2: 0.4
• LF3: 0.5
• LF4: 0.6
• UF1: 0.2
• UF2: 0.2
• UF3: 0.8
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_53795

• Blastp: Putative ribonuclease H protein At1g65750 from Arabidopsis with 28.81% of identity
• Blastx: Peroxisome biogenesis protein 16 from Arabidopsis with 48% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431061.1)
• Pfam: zinc-binding in reverse transcriptase (PF13966.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;