| Id Trinity | FTRINITY_DN57254_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_53798 |
| Sequence | ATTTGCATTAGACATGTCATTGCTAATTGATAGCATTATTATCTTTTACTTGAATAATTTAGATTAATGAAAGTAGTAATTGGTTCTTATAATAAAAATC CTAAGTACTCGAATAAAAGAACTATTAAATTGATTATAAAAACTCTTGAAGAGAAGATGATTTTTTTTGGTACATTGGAAAGAAAAAAATAAACTAAGCT AACAACGAAATATCTAACTGCAACAATAGTTGGCAATCTGTTGGGATTGAGTCCTAAATTTTCATCACATCTAGTGAGTGAGAACCTAATTTTGCCATGA AATCTGCTATCATATTAGCCCCTCTATTGACAAAGCAAACCTTAACGACCCAAGAAAGAGCCAACCAAGATCTGATCTTGTTGATCAAAGATAGAATGCT AGCAATTCGAATAGGAATCTCCTCAGAAATAATATGCACAGCTTCCAAGCAGTCGCTTTCCAAGACCACATTCCTGAAACCTAGACGCCAAGCCAGCGAC AACCCATTTTCGATAGCCAAAAGTTCTGCTAGAATAGAGGTCCCCTCACCATAGTTAGCAAAGAAACCCGATATCCATTGACCTTTAGAATCCCAAAGAA CGCCGCCCCCTCCCATTATGCAAGAGCTTCTGATGCAACTACCATCTACACTCAATTTGACCTGGCCCAACTCCGGGTAGCTCCAATGAGTCATGGGGTA CCTTTCCTCTAAAGACCGAGAACCGCCATAGTTGTGCCACTCCCAAAAATCCTGGTGAGTAAAGCGAACCACCAAATTGATATCCCACTGAGTATCCCCC ATAATAGTGTTATTCCTCCATCTCCAAGTCCACCAAATACCTGTCAAGAAGAGAAGACCATTTTTGCCATTATAATTCCCCCACAACCAGCCCTTAAAAG ACTGGGGTATCCAGAATCTAGGCGACGTGAAACCCAAGCGAACCCACAAAGATGATGAATCCTGACAATCCTTAAAGATGTGCAAGAGATCCTCGACACC CACCTGACACCTAACACAATTTGGGCTTGTAGCCAAGTGCCTTCTAAAGCGAAGAGCATTTGACGGAAGAGTGTCATGAAGACCAAGCCAACACATAAGT TTAACCTTCTCAAGAATCCTCAGCCTCCAAACCATTTTCCAGATGTCATCCATAGATGCCACATTTCCTTCCACATCCATAAGCCAGTCATAGGCCGACC TAGCAGTGTAAGAACCTGTAACATGCCCATCCCAAATCCACCCATTAGATTCAGTAAGAGAACCAGGCGAGTAATTTCCACAAATAAACTCCTTCACTTG CAACGGAAACATAGTATACAGTCTAGAAAAGTCCCAATTATCTGCTACCCATAGGTCCTTCACCTGAAGGTGAGTATCAGATATATGGACAAAATCCACA TAAGAACAAAGCATCCCCAAACCTGACCAATTTTCATACCATAAGGATTGATCCTCACTTCCCAAATGCAAGTTATAACCCAGTTTGAGCTTATCAAATG CTCTCACAATGCTTCTCCAGATATAAGACGTTGAAGCTTTTGGGGAGCAACAAATAAAGGATTGTACACCAGAGCTTATTGTTGCTACTGATCAAACTCC AACATAATTTTCCAAGAAGGGAAATGTTCGAAATTCTGGCATCCCTTATGCCCAATCCATTATCACGTCTACGCCTTGTGAGAACCTCCCAACTGACAAG ATGGAGGCCCCGACTATTAACATCACCACTCCAAATAAAATTTCTCGTCATCCTATTTATGTTATTGCATACAGTGTTAGGAAACCACAAGACCTGCATA TAATAAACCGGAATAGAGGAGATGACAGACTTCGCAAGGCATAAACGACTCGCTCTATTCAAGAGATTTGCTTTCCAAGAAGCCAAACGACACTGAATCT TCTCCAGAATAGGGTTAAAAATTGCCCTACCAACTCTTCCCTGAAGTAATGGTCCCCAAATAATTTCCAAGATTACCAACCACCCTCATGGAACAAAGCC TCATAAACCGGTTCTTCCCCCTGTTGGTCACAGATCTGGAGCAGATAAATTTTGATTTGTCTACACTCACTTTCAAACCCGATGCTTTACAGAAATCATT AAGAGTAGAGGAAACAACCCTAACCTGGGAGTTAGTTGCCTTGCAAAACAGTAAGACATCATCAGCAAAAAGGAGGTGAGAGATACTAGGGCCACCCCGA GAGAGTTTAATAGGATGCCATATGCCACTATCCACCTTCTGAGAGATAAGAAGAGTGAGCTTCTCCATGCACAAGACAAATAGATAAGGTGACATAGGAT CCCCTTGGTGAAGATCCCTACTAGGAGTAAATGCCTCCAGCCTAGAACCATTCCAAAGAAGAGACACCTTTCCAATGGTTTGTTCATGTTGATCTTGAAA ATGTTAGCTAGAAAATAGAAATAAGTTTACTTGGCAGAGCCTTGTGCCTTCTTAGATTCAATATGTTGCAAATTTCTAAAGTCACACACATTACATTCTT CTATTTACCTACATCTCCTATAAAGTATTGCAAATTCTTATTGTCTTTTCTTTTTATCAACTTTCCTCCTATCATGCCTATGATATTGAAATTTCTAGCT TACTTGTCAGATCAACAACTTTGTGCAGTGACTACAATTTTGGGAATTATCATAGCTGTCAATGAACATATAATTGATACAGCTCCTACCCAAAATAATA CAGGCTCTACTGAGAAATATTTGTTTCCTTATCCATTATGCTTATCTGCATTGAAGGATTTGGAAATGTTAGTTGAAGTTGTGTCACAACATTACTATGG CGATGATAAGAAATGGAATTTCCTTGCTATTACTGAAGGAACCAAGTAAAGATCATAATCTAATTTAGCATATGTCCCTTCCTTTGTTATCGATCCAAAT TTATCATTATCTTCCGTCGCTCTAACTCAGGGTTCTGGTTCGACTATCATTGTTTTGGAAGAGTGGATATAAGATGCTGCTTCATGGAGGGGAGACATAT AATGATGAGACACATTCAGATAGTTTCGCTTCACAACACCAAACAATCTTAAAGCCTGATGGACACCGTGGTTCTGATTATATGAGAAACAATCATGGTC CAAACCCATGGAATCTGGAAGGAAGAGCACTATCTGCTTTAAGTAGTTTCGGAGAAAAAGCCAGAACGGGGTCAGATCCAATGTGGTTACGTAGGGTTCA TCATCAACAAGCAACTCTGGAGCATACTGGTAATCGGTTTTGAAGATTTTTTAGCTGTAGACAGTAAACTAATTGATTATAATGCTTGTGGAAGTCAACT AGTTCTTGTTGCCCGCTGCATTTTTGCAGTCTCAAGGGTAGAGAGACCAACACTTTCTAGCATATTGTCCAAAAGAGGTCTTCACGGGGTTCTGTTTCTG ATTGGCGAAGTTCTATTTATTAGTAGACCACTTATTAATGTTCTATTTATTCGAAAATATGGTGTCCGGACATGGACCCCTTGGTCCCTTTCACTGGCTA TTGACTGCATATCAAACAGTATTCTTTCACTTGTTATGACATCTGTAGATGGTGGGGATGAGCAGAAGTTTCATCTTTCTGCTCCAGAAAAGGATGAGGT TAAACGATGGAAGCTGTTATTTTTGTACTTTACCTAATGAGAGATCCATTTCTCAGCAAGTATACTAGGCAAAGACTCGAAAGCACGGAGACAATTTTGG AACCTTTACCTATCATAGGATTTCTTGCAGCAAAAATCGTTGAGCTTATAATTGGAGCGCAAACTCGATACACTTACATGTCGGGATCATGATATAAAAT CTAGAAGAAACACTTCACTGCCTTCCCAGATTGTGGGAAAGCATCTTACTGTGCTCTCACATTATCTCCTGTTCCAAAATTTTCAAATGATGAGGGGATA TGAAGTATGCTACTACTTTGATTGAAAAGTAAGAAAAATGGCAAGCTTGAACATTTGTTTTGCACAATGATGGAAGGTTATGGCTGTCTGCGAATTCAAC ACCGAACGTGAAACTTTTATTTCATTCGGTTCCTTTACGGACTTAATTCAGAGATGTTGGACAAGTTGATTGCAAGGATGGCTCTACTATCAACATTTGT TTTGAAATTTTTTGCTTTAATTTTAATAATAAAAAAGAGAAATAACAAAAGATACTGATTTGTCAAAAATATTATTAGATGCCAGTGCAAAGATATTATC ACACTTGCATACCAATTAAACATTTCATTGTTTTATTCTACTCCCAAACAAAGAGGGTTGGTGAGTCTACCTCAAACACTTGTAGTTATGAGCGTCAGTC AATTGGAAAGTTTATCATGTGATTCTTCAGCTCAGCAAGCTGTATTCTGATCGGAGTTTCAAGACAAACCGGTTTTTGCCTTGGCCGGCTGGTTATCCGG TGTGGCATGCCTTTTAATAGTCTAATCCGGTTCAACCTTGAATTGGACAAAGACACCTGGTTAGGACAGGCACAATTTTCACTTCAAGGTTGGACCGGAC GAGTCGGACTGCTGGTACGGTTGTACAACAAAGCAAACCATTATTCTACACCTTTGTAGGTATTACAGTTGTTCTGTAGTGATGTAGCCATTTATTATTT TCGCGTGTCATTGTCCTTTTGATGGTTGAACTAAATGTCTCTGTTTGTTAAGGTACTATGAAATTATTCACAAGCATATTCGTCTTATATATCTGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_67147; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_53798
| Blastp | Putative ribonuclease H protein At1g65750 from Arabidopsis with 28.79% of identity |
|---|---|
| Blastx | Peroxisome biogenesis protein 16 from Arabidopsis with 48% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431061.1) |
| Pfam | zinc-binding in reverse transcriptase (PF13966.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |